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    rpoC DNA-directed RNA polymerase subunit beta' [ Thermus thermophilus HB8 ]

    Gene ID: 3169754, updated on 12-Feb-2024

    Summary

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    Gene symbol
    rpoC
    Gene description
    DNA-directed RNA polymerase subunit beta'
    Locus tag
    TTH_RS09200
    Gene type
    protein coding
    Organism
    Thermus thermophilus HB8 (strain: HB8, type-material: type strain of Thermus thermophilus)
    Lineage
    Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus
    Old locus tag
    TTHA1812
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_006461.1 (1689655..1694229, complement)

    Chromosome 1 - NC_006461.1Genomic Context describing neighboring genes Neighboring gene alpha/beta hydrolase Neighboring gene hypothetical protein Neighboring gene fuculose-1-phosphate aldolase Neighboring gene DNA-directed RNA polymerase subunit beta Neighboring gene S4 domain-containing protein Neighboring gene 3-hydroxyacyl-ACP dehydratase FabZ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006461.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides. Zhang Y, et al. Elife, 2014 Apr 22. PMID 24755292, Free PMC Article
    2. Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme from Thermus thermophilus. Vassylyeva MN, et al. Acta Crystallogr D Biol Crystallogr, 2002 Sep. PMID 12198314

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase subunit beta'
    WP_011228934.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006461.1 Reference assembly

      Range
      1689655..1694229 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011228934.1 MULTISPECIES: DNA-directed RNA polymerase subunit beta' [Thermus]

      See identical proteins and their annotated locations for WP_011228934.1

      UniProtKB/Swiss-Prot
      Q5SHB8, Q8RQE8
      Conserved Domains (1) summary
      PRK00566
      Location:446 → 1497
      PRK00566; DNA-directed RNA polymerase subunit beta'; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    2CW0_D.1
    2CW0_N.1
    2O5I_D.1
    2O5I_N.1
    2O5J_D.1
    2O5J_N.1
    2PPB_D.1
    2PPB_N.1
    3AOH_D.1
    3AOH_I.1
    3AOH_N.1
    3AOI_D.1
    3AOI_I.1
    3AOI_N.1
    3DXJ_D.1
    3DXJ_N.1
    3WOD_D.1
    4G7H_D.1
    4G7H_N.1
    4G7O_D.1
    4G7O_N.1
    4G7Z_D.1
    4G7Z_N.1
    4MQ9_D.1
    4OIN_D.1
    4OIO_D.1
    4OIP_D.1
    4OIQ_D.1
    4OIR_D.1
    4Q4Z_D.1
    4Q5S_D.1
    4WQS_D.1
    4WQS_N.1
    4WQT_D.1
    4WQT_I.1
    4WQT_N.1
    5D4C_D.1
    5D4C_N.1
    5D4D_D.1
    5D4D_N.1
    5D4E_D.1
    5D4E_N.1
    5E17_D.1
    5E18_D.1
    5I2D_D.1
    5I2D_O.1
    5VO8_D.1
    5VOI_D.1
    5X21_D.1
    5X22_D.1
    5X22_N.1
    5XJ0_D.1
    6ASG_D.1
    6KQD_D.1
    6KQD_N.1
    6KQE_D.1
    6KQF_D.1
    6KQG_D.1
    6KQH_D.1
    6KQL_D.1
    6KQM_D.1
    6KQN_D.1
    6L74_D.1
    6LTS_D.1
    6M6A_D.1
    6M6B_D.1
    6M6C_D.1
    6OVR_D.1
    7EH0_D.1
    7EH1_D.1
    7EH2_D.1
    7EH2_N.1
    Q8RQE8.1

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