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    LOC123935866 sex-determining region Y protein-like [ Meles meles (Eurasian badger) ]

    Gene ID: 123935866, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC123935866
    Gene description
    sex-determining region Y protein-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Meles meles
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Melinae; Meles
    Also known as
    Sry; TDF
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    Genomic context

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    See LOC123935866 in Genome Data Viewer
    Location:
    chromosome: Y
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current mMelMel3.1 paternal haplotype (GCF_922984935.1) Y NC_060088.1 (9518107..9518625)

    Chromosome Y - NC_060088.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-like modifier-activating enzyme 1 Neighboring gene sex-determining region Y protein-like Neighboring gene cullin-4B-like Neighboring gene hsc70-interacting protein-like Neighboring gene testis-specific Y-encoded protein 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_060088.1 Chromosome Y Reference mMelMel3.1 paternal haplotype Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in male sex determination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sex-determining region Y protein-like
    Names
    Sex-determining region Y protein
    Testis-determining factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Meles meles Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMelMel3.1 paternal haplotype Primary Assembly

    Genomic

    1. NC_060088.1 Reference mMelMel3.1 paternal haplotype Primary Assembly

      Range
      9518107..9518625
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045996703.1 → XP_045852659.1  sex-determining region Y protein-like

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P36392.1 GenPept UniProtKB/Swiss-Prot:P36392

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