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    EHI_007980 uncharacterized protein [ Entamoeba histolytica HM-1:IMSS ]

    Gene ID: 3408681, updated on 17-May-2024

    Summary

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    Gene symbol
    EHI_007980
    Gene description
    uncharacterized protein
    Locus tag
    EHI_007980
    See related
    AmoebaDB:EHI_007980; VEuPathDB:EHI_007980
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Entamoeba histolytica HM-1:IMSS (strain: HM-1:IMSS)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
    Old locus tag
    55.t00008
    NEW
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    Genomic context

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    See EHI_007980 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_001914893.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001914893.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the protist parasite Entamoeba histolytica. Loftus B, et al. Nature, 2005 Feb 24. PMID 15729342
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of 90S preribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_654373.1
    • encoded by transcript EHI_007980A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001914893.1 Reference assembly

      Range
      41471..42079 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_649281.1 → XP_654373.1  uncharacterized protein EHI_007980 [Entamoeba histolytica HM-1:IMSS]

      See identical proteins and their annotated locations for XP_654373.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A175JJN1, A0A5K1VM88, C4LYD5, M2RZH4, M3TM03, M7X0A7, N9TKT2
      Conserved Domains (1) summary
      pfam06102
      Location:3 → 153
      DUF947; Domain of unknown function (DUF947)
    Nucleotide Protein
    Heading Accession and Version

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