U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    mars1 methionyl-tRNA synthetase 1 [ Poecilia formosa (Amazon molly) ]

    Gene ID: 103135795, updated on 11-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    mars1
    Gene description
    methionyl-tRNA synthetase 1
    See related
    Ensembl:ENSPFOG00000006998
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Poecilia formosa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
    Also known as
    mars
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See mars1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799941.1 (1352586..1368108)

    NW_006799941.1Genomic Context describing neighboring genes Neighboring gene zinc finger E-box-binding homeobox 2-like Neighboring gene Rho GTPase activating protein 9 Neighboring gene DNA-damage-inducible transcript 3 Neighboring gene dynactin 2 (p50)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_006799941.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methionine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methionyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of aminoacyl-tRNA synthetase multienzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    methionine--tRNA ligase, cytoplasmic

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Poecilia_formosa-5.1.2

    Genomic

    1. NW_006799941.1 Reference Poecilia_formosa-5.1.2

      Range
      1352586..1368108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016670094.1 → XP_016525580.1  methionine--tRNA ligase, cytoplasmic isoform X1

      UniProtKB/TrEMBL
      A0A087XM94
      Related
      ENSPFOP00000006897.2, ENSPFOT00000006909.2

    2. XM_007548719.2 → XP_007548781.1  methionine--tRNA ligase, cytoplasmic isoform X2

      UniProtKB/TrEMBL
      A0A096ME84
      Related
      ENSPFOP00000029725.1, ENSPFOT00000029402.1
      Conserved Domains (7) summary
      cd07957
      Location:641 → 770
      Anticodon_Ia_Met; Anticodon-binding domain of methionyl tRNA synthetases
      cd00814
      Location:264 → 632
      MetRS_core; catalytic core domain of methioninyl-tRNA synthetases
      COG0625
      Location:1 → 183
      GstA; Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
      PRK12268
      Location:263 → 822
      PRK12268; methionyl-tRNA synthetase; Reviewed
      cd00570
      Location:1 → 67
      GST_N_family; Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic ...
      pfam00458
      Location:856 → 908
      WHEP-TRS; WHEP-TRS domain
      cl02776
      Location:77 → 176
      GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.