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    tex11 testis expressed 11 [ Anolis carolinensis (green anole) ]

    Gene ID: 100566135, updated on 8-Mar-2024

    Summary

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    Gene symbol
    tex11
    Gene description
    testis expressed 11
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
    Orthologs
    human mouse all
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    Genomic context

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    See tex11 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) Unplaced Scaffold NW_026943823.1 (15951680..15973130, complement)
    102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003339305.1 (51736..73465, complement)

    NW_026943823.1Genomic Context describing neighboring genes Neighboring gene sestrin-3 Neighboring gene uncharacterized LOC134294090 Neighboring gene discs large MAGUK scaffold protein 3 Neighboring gene nuclear cap-binding protein subunit 2 Neighboring gene solute carrier family 7 member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in male meiosis chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in reciprocal meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptonemal complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in central element IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    testis-expressed protein 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAnoCar3.1.pri

    Genomic

    1. NW_026943823.1 Reference rAnoCar3.1.pri

      Range
      15951680..15973130 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008122806.3 → XP_008121013.1  testis-expressed protein 11 isoform X1

      Conserved Domains (3) summary
      sd00006
      Location:397 → 429
      TPR; TPR repeat [structural motif]
      pfam08631
      Location:167 → 422
      SPO22; Meiosis protein SPO22/ZIP4 like
      pfam13414
      Location:401 → 467
      TPR_11; TPR repeat

    2. XM_062963985.1 → XP_062820055.1  testis-expressed protein 11 isoform X3

    3. XM_008122807.3 → XP_008121014.1  testis-expressed protein 11 isoform X2

      UniProtKB/TrEMBL
      H9GLX6
      Conserved Domains (3) summary
      sd00006
      Location:397 → 429
      TPR; TPR repeat [structural motif]
      pfam08631
      Location:167 → 422
      SPO22; Meiosis protein SPO22/ZIP4 like
      pfam13414
      Location:401 → 467
      TPR_11; TPR repeat
    Nucleotide Protein
    Heading Accession and Version

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