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    cgd6_3420 translation initiation factor EIF-2B epsilon subunit [ Cryptosporidium parvum Iowa II ]

    Gene ID: 3375709, updated on 17-May-2024

    Summary

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    Gene symbol
    cgd6_3420
    Gene description
    translation initiation factor EIF-2B epsilon subunit
    Locus tag
    cgd6_3420
    See related
    ApiDB_CryptoDB:cgd6_3420; CryptoDB:cgd6_3420; VEuPathDB:cgd6_3420
    Gene type
    protein coding
    RNA name
    translation initiation factor EIF-2B epsilon subunit
    RefSeq status
    PROVISIONAL
    Organism
    Cryptosporidium parvum Iowa II (isolate: Iowa type II)
    Lineage
    Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    1
    Sequence:
    Chromosome: 6; NC_006985.1 (802817..805195)

    Chromosome 6 - NC_006985.1Genomic Context describing neighboring genes Neighboring gene protein kinase Neighboring gene tubulin, gamma tubulin complex protein 3 Neighboring gene RRM (2xRRMs) domaincontaining protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006985.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of the apicomplexan, Cryptosporidium parvum. Abrahamsen MS, et al. Science, 2004 Apr 16. PMID 15044751
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of eukaryotic translation initiation factor 2B complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    translation initiation factor EIF-2B epsilon subunit

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006985.1 Reference assembly

      Range
      802817..805195
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_627686.1 → XP_627686.1  translation initiation factor EIF-2B epsilon subunit [Cryptosporidium parvum Iowa II]

      See identical proteins and their annotated locations for XP_627686.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7G2HJ31, Q5CWW8
      Conserved Domains (3) summary
      cd04197
      Location:26 → 250
      eIF-2B_epsilon_N; The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2
      cd11558
      Location:594 → 778
      W2_eIF2B_epsilon; C-terminal W2 domain of eukaryotic translation initiation factor 2B epsilon
      cl00160
      Location:353 → 428
      LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
    Nucleotide Protein
    Heading Accession and Version

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