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    Fbxo43 F-box protein 43 [ Fukomys damarensis (Damara mole-rat) ]

    Gene ID: 104859073, updated on 12-Mar-2024

    Summary

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    Gene symbol
    Fbxo43
    Gene description
    F-box protein 43
    Locus tag
    H920_03371
    See related
    Ensembl:ENSFDAG00000008991
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Fukomys damarensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
    Orthologs
    human mouse all
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    Genomic context

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    See Fbxo43 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900917.1 (15536371..15549710)
    101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011044462.1 (11189616..11202960)

    NW_022900917.1Genomic Context describing neighboring genes Neighboring gene cytospin-B-like Neighboring gene RNA polymerase II, I and III subunit K Neighboring gene regulator of G protein signaling 22 Neighboring gene U6 spliceosomal RNA Neighboring gene cytochrome c oxidase subunit 6C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of meiotic nuclear division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mitotic nuclear division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box only protein 43

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DMR_v1.0_HiC Primary Assembly

    Genomic

    1. NW_022900917.1 Reference DMR_v1.0_HiC Primary Assembly

      Range
      15536371..15549710
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010619550.1 → XP_010617852.1  F-box only protein 43 isoform X1

      UniProtKB/TrEMBL
      A0A091EIF2
      Conserved Domains (1) summary
      pfam01485
      Location:619 → 673
      IBR; IBR domain, a half RING-finger domain

    2. XM_010619552.1 → XP_010617854.1  F-box only protein 43 isoform X3

      See identical proteins and their annotated locations for XP_010617854.1

      UniProtKB/TrEMBL
      A0A091EIF2
      Conserved Domains (1) summary
      pfam01485
      Location:583 → 637
      IBR; IBR domain, a half RING-finger domain

    3. XM_010619551.1 → XP_010617853.1  F-box only protein 43 isoform X2

      UniProtKB/TrEMBL
      A0A091EIF2
      Related
      ENSFDAP00000019653.1, ENSFDAT00000012573.1
      Conserved Domains (1) summary
      pfam01485
      Location:591 → 645
      IBR; IBR domain, a half RING-finger domain
    Nucleotide Protein
    Heading Accession and Version

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