U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC104069336 1-aminocyclopropane-1-carboxylate synthase-like protein 1 [ Fulmarus glacialis (Northern fulmar) ]

    Gene ID: 104069336, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC104069336
    Gene description
    1-aminocyclopropane-1-carboxylate synthase-like protein 1
    Locus tag
    N327_08006
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Fulmarus glacialis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Fulmarus
    Annotation information
    Annotation category: partial on reference assembly
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC104069336 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current ASM69083v1 (GCF_000690835.1) Unplaced Scaffold NW_009228763.1 (61..13195)

    NW_009228763.1Genomic Context describing neighboring genes Neighboring gene GATA zinc finger domain containing 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_009228763.1 Unplaced Scaffold Reference ASM69083v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    1-aminocyclopropane-1-carboxylate synthase-like protein 1
    Names
    1-aminocyclopropane-1-carboxylate synthase-like 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Fulmarus glacialis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69083v1

    Genomic

    1. NW_009228763.1 Reference ASM69083v1

      Range
      61..13195
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009583572.1 → XP_009581867.1  1-aminocyclopropane-1-carboxylate synthase-like protein 1

      Conserved Domains (2) summary
      cd00609
      Location:3 → 379
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      pfam00155
      Location:2 → 364
      Aminotran_1_2; Aminotransferase class I and II
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases