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    NCOA1 nuclear receptor coactivator 1 [ Pygoscelis adeliae (Adelie penguin) ]

    Gene ID: 103913284, updated on 3-Aug-2024

    Summary

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    Gene symbol
    NCOA1
    Gene description
    nuclear receptor coactivator 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pygoscelis adeliae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
    Orthologs
    human mouse all
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    Genomic context

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    See NCOA1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008824359.1 (9359123..9489279)

    NW_008824359.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase PDIK1L-like Neighboring gene zinc finger protein 395 Neighboring gene peptidyl-tRNA hydrolase domain containing 1 Neighboring gene centromere protein O

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008824359.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to hormone stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: nuclear receptor coactivator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69910v1 Primary Assembly

    Genomic

    1. NW_008824359.1 Reference ASM69910v1 Primary Assembly

      Range
      9359123..9489279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009319764.1 → XP_009318039.1  LOW QUALITY PROTEIN: nuclear receptor coactivator 1

      Conserved Domains (9) summary
      smart00353
      Location:31 → 85
      HLH; helix loop helix domain
      cd00130
      Location:118 → 211
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      pfam00989
      Location:114 → 171
      PAS; PAS fold
      pfam07469
      Location:1148 → 1204
      DUF1518; Domain of unknown function (DUF1518)
      pfam08815
      Location:924 → 970
      Nuc_rec_co-act; Nuclear receptor coactivator
      pfam08832
      Location:562 → 639
      SRC-1; Steroid receptor coactivator
      pfam14598
      Location:258 → 366
      PAS_11; PAS domain
      pfam16279
      Location:666 → 756
      DUF4927; Domain of unknown function (DUF4927)
      pfam16665
      Location:459 → 559
      NCOA_u2; Unstructured region on nuclear receptor coactivator protein
    Nucleotide Protein
    Heading Accession and Version

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