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    Tc00.1047053511859.180 proteasome regulatory ATPase subunit 2, putative [ Trypanosoma cruzi ]

    Gene ID: 3547009, updated on 23-Nov-2023

    Summary

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    Gene symbol
    Tc00.1047053511859.180
    Gene description
    proteasome regulatory ATPase subunit 2, putative
    Locus tag
    Tc00.1047053511859.180
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trypanosoma cruzi (strain: CL Brener)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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    Genomic context

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    See Tc00.1047053511859.180 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001849490.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene NADH-cytochrome B5 reductase, putative Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001849490.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
    2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • heterozygous, non-Esmeraldo-like haplotype
      allele of Tc00.1047053511047.50

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proteasome-activating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome regulatory particle, base subcomplex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome regulatory ATPase subunit 2, putative
    XP_815312.1
    • heterozygous, non-Esmeraldo-like haplotype
      allele of Tc00.1047053511047.50

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001849490.1 Reference assembly

      Range
      186884..188197 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_810219.1 → XP_815312.1  proteasome regulatory ATPase subunit 2, putative [Trypanosoma cruzi]

      See identical proteins and their annotated locations for XP_815312.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2V2V9N1, K2N3N6, Q4D0B9, V5AV12
      Conserved Domains (1) summary
      PTZ00361
      Location:2 → 437
      PTZ00361; 26 proteosome regulatory subunit 4-like protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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