U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    SJAG_00545 PWWP domain-containing protein Pdp1 [ Schizosaccharomyces japonicus yFS275 ]

    Gene ID: 7051243, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SJAG_00545
    Gene description
    PWWP domain-containing protein Pdp1
    Primary source
    FungiDB:SJAG_00545
    Locus tag
    SJAG_00545
    See related
    VEuPathDB:SJAG_00545
    Gene type
    protein coding
    RNA name
    PWWP domain-containing protein Pdp1
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces japonicus yFS275 (strain: yFS275)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_011627860.1Genomic Context describing neighboring genes Neighboring gene inorganic phosphate transporter Neighboring gene ubiquitin carboxy terminal hydrolase Ubp9 Neighboring gene carboxylic acid transporter Neighboring gene 40S ribosomal protein S9 Neighboring gene F1-ATPase subunit H Neighboring gene AAA family ATPase Gcn20 Neighboring gene elongin-A

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_011627860.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by JaponicusDB

    Function Evidence Code Pubs
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of NuA3 histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Names
    PWWP domain-containing protein Pdp1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_011627860.1 Reference assembly

      Range
      3149110..3151429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002171788.2 → XP_002171824.2  PWWP domain-containing protein Pdp1 [Schizosaccharomyces japonicus yFS275]

      See identical proteins and their annotated locations for XP_002171824.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B6JVY0
      Conserved Domains (1) summary
      cl02554
      Location:53 → 151
      PWWP; The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids. The PWWP domain is found in numerous proteins that are involved in cell division, growth and differentiation. Most PWWP-domain proteins ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials