U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    CBFB core-binding factor subunit beta [ Felis catus (domestic cat) ]

    Gene ID: 101087541, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CBFB
    Gene description
    core-binding factor subunit beta
    See related
    EnsemblRapid:ENSFCTG00005003408
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Also known as
    CBFb-2; CBF-beta
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CBFB in Genome Data Viewer
    Location:
    chromosome: E2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E2 NC_058382.1 (42615405..42672676)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E2 NC_018737.3 (44803735..44860954)

    Chromosome E2 - NC_058382.1Genomic Context describing neighboring genes Neighboring gene carboxylesterase 3 Neighboring gene uncharacterized LOC102900873 Neighboring gene carboxylesterase 4A Neighboring gene uncharacterized LOC111558129 Neighboring gene chromosome E2 C16orf70 homolog Neighboring gene F-box and leucine rich repeat protein 8 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 Neighboring gene TNFRSF1A associated via death domain

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Vif determines the requirement for CBF-β in APOBEC3 degradation. Yoshikawa R, et al. J Gen Virol, 2015 Apr. PMID 25516542, Free PMC Article
    2. Core-binding factor subunit beta is not required for non-primate lentiviral Vif-mediated APOBEC3 degradation. Ai Y, et al. J Virol, 2014 Oct. PMID 25122780, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of core-binding factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    core-binding factor subunit beta
    Names
    core-binding factor beta subunit

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001305028.1 → NP_001291957.1  core-binding factor subunit beta

      See identical proteins and their annotated locations for NP_001291957.1

      Status: PROVISIONAL

      Source sequence(s)
      KM250107
      UniProtKB/TrEMBL
      A0A077DAU5
      Conserved Domains (1) summary
      pfam02312
      Location:1 → 167
      CBF_beta; Core binding factor beta subunit

    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058382.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      42615405..42672676
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023244834.2 → XP_023100602.1  core-binding factor subunit beta isoform X1

      UniProtKB/TrEMBL
      A0A337SBW4
      Related
      ENSFCTP00005005468.1, ENSFCTT00005009065.1
      Conserved Domains (1) summary
      pfam02312
      Location:1 → 167
      CBF_beta; Core binding factor beta subunit
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.