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    SKP1 S-phase kinase associated protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 615427, updated on 24-Aug-2024

    Summary

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    Gene symbol
    SKP1
    Gene description
    S-phase kinase associated protein 1
    See related
    BGD:BT21969; Ensembl:ENSBTAG00000025191
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    SKP1A
    Orthologs
    human mouse all
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    Genomic context

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    See SKP1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (45805398..45817464, complement)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132345820 Neighboring gene voltage dependent anion channel 1 Neighboring gene transcription factor 7 Neighboring gene protein phosphatase 2 catalytic subunit alpha Neighboring gene uncharacterized LOC112447418

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of SCF-Complex during Bovine Preimplantation Development. Benesova V, et al. PLoS One, 2016. PMID 26824694, Free PMC Article
    2. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    3. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The SCF-complex gene expression has been characterized during bovine preimplantation development.
      Title: Characterization of SCF-Complex during Bovine Preimplantation Development.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC127638

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cullin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    S-phase kinase-associated protein 1
    Names
    S-phase kinase-associated protein 1A (p19A)
    cyclin-A/CDK2-associated protein p19
    p19A
    p19skp1
    NP_001029953.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034781.2 → NP_001029953.1  S-phase kinase-associated protein 1

      See identical proteins and their annotated locations for NP_001029953.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102435
      UniProtKB/Swiss-Prot
      Q3ZCF3
      UniProtKB/TrEMBL
      A0A3Q1MEL2
      Related
      ENSBTAP00000095387.1, ENSBTAT00000121989.1
      Conserved Domains (2) summary
      cd18322
      Location:4 → 127
      BTB_POZ_SKP1; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in S-phase kinase-associated protein 1 (SKP1) and similar proteins
      pfam01466
      Location:113 → 160
      Skp1; Skp1 family, dimerization domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      45805398..45817464 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3ZCF3.1 GenPept UniProtKB/Swiss-Prot:Q3ZCF3

    Gene LinkOut

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