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    STAU2 staufen double-stranded RNA binding protein 2 [ Cercocebus atys (sooty mangabey) ]

    Gene ID: 105585270, updated on 13-Mar-2024

    Summary

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    Gene symbol
    STAU2
    Gene description
    staufen double-stranded RNA binding protein 2
    See related
    Ensembl:ENSCATG00000044825
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cercocebus atys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
    Orthologs
    human mouse all
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    Genomic context

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    See STAU2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012009137.1 (12904139..13244924, complement)

    NW_012009137.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 10 Neighboring gene ribosomal protein L7 Neighboring gene homeobox protein VENTX pseudogene Neighboring gene ubiquitin conjugating enzyme E2 W Neighboring gene glycogenin-1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012009137.1 Unplaced Scaffold Reference Caty_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    double-stranded RNA-binding protein Staufen homolog 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Caty_1.0

    Genomic

    1. NW_012009137.1 Reference Caty_1.0

      Range
      12904139..13244924 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012058795.1 → XP_011914185.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X17

      See identical proteins and their annotated locations for XP_011914185.1

      UniProtKB/TrEMBL
      A0A2K5P4U2
      Conserved Domains (4) summary
      cd19882
      Location:1 → 75
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:102 → 168
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:200 → 285
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19888
      Location:390 → 457
      DSRM_STAU2_rpt5; fifth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    2. XM_012058788.1 → XP_011914178.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X13

      See identical proteins and their annotated locations for XP_011914178.1

      UniProtKB/TrEMBL
      A0A2K5P4V0
      Related
      ENSCATP00000044733.1, ENSCATT00000069175.1
      Conserved Domains (5) summary
      pfam16482
      Location:427 → 491
      Staufen_C; Staufen C-terminal domain
      cd19882
      Location:66 → 147
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:174 → 240
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:272 → 357
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cl00054
      Location:6 → 38
      DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

    3. XM_012058786.1 → XP_011914176.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X11

      See identical proteins and their annotated locations for XP_011914176.1

      UniProtKB/TrEMBL
      A0A2K5P4V0
      Conserved Domains (5) summary
      pfam16482
      Location:459 → 523
      Staufen_C; Staufen C-terminal domain
      cd19882
      Location:98 → 179
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:206 → 272
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:304 → 389
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cl00054
      Location:3 → 70
      DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

    4. XM_012058797.1 → XP_011914187.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X19

      See identical proteins and their annotated locations for XP_011914187.1

      Conserved Domains (3) summary
      pfam16482
      Location:287 → 351
      Staufen_C; Staufen C-terminal domain
      cd19884
      Location:34 → 100
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:132 → 217
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    5. XM_012058782.1 → XP_011914172.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X8

      See identical proteins and their annotated locations for XP_011914172.1

      UniProtKB/TrEMBL
      A0A2K5P4T8, A0A2K5P4U2
      Related
      ENSCATP00000044729.1, ENSCATT00000069171.1
      Conserved Domains (5) summary
      cd19880
      Location:3 → 70
      DSRM_STAU2_rpt1; first double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19882
      Location:98 → 179
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:206 → 272
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:304 → 389
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19888
      Location:494 → 561
      DSRM_STAU2_rpt5; fifth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    6. XM_012058789.1 → XP_011914179.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X14

      UniProtKB/TrEMBL
      A0A2K5P504
      Related
      ENSCATP00000044738.1, ENSCATT00000069180.1
      Conserved Domains (2) summary
      smart00358
      Location:308 → 374
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:459 → 515
      Staufen_C; Staufen C-terminal domain

    7. XM_012058785.1 → XP_011914175.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X10

      UniProtKB/TrEMBL
      A0A2K5P504
      Conserved Domains (2) summary
      smart00358
      Location:308 → 374
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:459 → 548
      Staufen_C; Staufen C-terminal domain

    8. XM_012058787.1 → XP_011914177.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X12

      UniProtKB/TrEMBL
      A0A2K5P504
      Conserved Domains (2) summary
      smart00358
      Location:308 → 374
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:459 → 511
      Staufen_C; Staufen C-terminal domain

    9. XM_012058784.1 → XP_011914174.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X9

      Conserved Domains (4) summary
      smart00358
      Location:204 → 270
      DSRM; Double-stranded RNA binding motif
      cd00048
      Location:37 → 75
      DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
      pfam16482
      Location:355 → 444
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:425 → 471
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    10. XM_012058793.1 → XP_011914183.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X16

      See identical proteins and their annotated locations for XP_011914183.1

      Conserved Domains (3) summary
      smart00358
      Location:136 → 202
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:287 → 376
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:357 → 403
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    11. XM_012058792.1 → XP_011914182.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X16

      See identical proteins and their annotated locations for XP_011914182.1

      Conserved Domains (3) summary
      smart00358
      Location:136 → 202
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:287 → 376
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:357 → 403
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    12. XM_012058791.1 → XP_011914181.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X16

      See identical proteins and their annotated locations for XP_011914181.1

      Conserved Domains (3) summary
      smart00358
      Location:136 → 202
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:287 → 376
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:357 → 403
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    13. XM_012058777.1 → XP_011914167.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X6

      Conserved Domains (3) summary
      smart00358
      Location:288 → 354
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:439 → 528
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:509 → 555
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    14. XM_012058772.1 → XP_011914162.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X3

      See identical proteins and their annotated locations for XP_011914162.1

      Conserved Domains (3) summary
      smart00358
      Location:308 → 374
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:459 → 548
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:529 → 575
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    15. XM_012058770.1 → XP_011914160.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X2

      Conserved Domains (3) summary
      smart00358
      Location:317 → 383
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:468 → 557
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:538 → 584
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    16. XM_012058771.1 → XP_011914161.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X3

      See identical proteins and their annotated locations for XP_011914161.1

      Conserved Domains (3) summary
      smart00358
      Location:308 → 374
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:459 → 548
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:529 → 575
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    17. XM_012058776.1 → XP_011914166.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X5

      Conserved Domains (3) summary
      smart00358
      Location:290 → 356
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:441 → 530
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:511 → 557
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    18. XM_012058773.1 → XP_011914163.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X3

      See identical proteins and their annotated locations for XP_011914163.1

      Conserved Domains (3) summary
      smart00358
      Location:308 → 374
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:459 → 548
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:529 → 575
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    19. XM_012058774.1 → XP_011914164.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X3

      See identical proteins and their annotated locations for XP_011914164.1

      Conserved Domains (3) summary
      smart00358
      Location:308 → 374
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:459 → 548
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:529 → 575
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    20. XM_012058769.1 → XP_011914159.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

      Conserved Domains (3) summary
      smart00358
      Location:300 → 366
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:451 → 540
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:521 → 567
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    21. XM_012058781.1 → XP_011914171.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X7

      See identical proteins and their annotated locations for XP_011914171.1

      Conserved Domains (3) summary
      smart00358
      Location:276 → 342
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:427 → 516
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:497 → 543
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    22. XM_012058780.1 → XP_011914170.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X7

      See identical proteins and their annotated locations for XP_011914170.1

      Conserved Domains (3) summary
      smart00358
      Location:276 → 342
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:427 → 516
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:497 → 543
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    23. XM_012058778.1 → XP_011914168.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X7

      See identical proteins and their annotated locations for XP_011914168.1

      Conserved Domains (3) summary
      smart00358
      Location:276 → 342
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:427 → 516
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:497 → 543
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    24. XM_012058779.1 → XP_011914169.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X7

      See identical proteins and their annotated locations for XP_011914169.1

      Conserved Domains (3) summary
      smart00358
      Location:276 → 342
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:427 → 516
      Staufen_C; Staufen C-terminal domain
      cl22435
      Location:497 → 543
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    25. XM_012058775.1 → XP_011914165.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X4

      Conserved Domains (2) summary
      smart00358
      Location:308 → 374
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:459 → 511
      Staufen_C; Staufen C-terminal domain

    26. XM_012058796.1 → XP_011914186.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X18

      See identical proteins and their annotated locations for XP_011914186.1

      UniProtKB/TrEMBL
      A0A2K5P4Z9, A0A2K5P504
      Related
      ENSCATP00000044737.1, ENSCATT00000069179.1
      Conserved Domains (5) summary
      pfam16482
      Location:427 → 479
      Staufen_C; Staufen C-terminal domain
      cd19882
      Location:66 → 147
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:174 → 240
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:272 → 357
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cl00054
      Location:6 → 38
      DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

    27. XM_012058790.1 → XP_011914180.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X15

      UniProtKB/TrEMBL
      A0A2K5P504
      Conserved Domains (2) summary
      smart00358
      Location:317 → 383
      DSRM; Double-stranded RNA binding motif
      pfam16482
      Location:468 → 520
      Staufen_C; Staufen C-terminal domain
    Nucleotide Protein
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