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    LOC105662519 jerky protein homolog-like [ Megachile rotundata (alfalfa leafcutting bee) ]

    Gene ID: 105662519, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC105662519
    Gene description
    jerky protein homolog-like
    See related
    EnsemblRapid:LOC105662519
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Megachile rotundata
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
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    Genomic context

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    See LOC105662519 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797054.1 (653633..655733, complement)

    NW_003797054.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid receptor subunit beta-1-like Neighboring gene uncharacterized LOC105662438 Neighboring gene pyruvate kinase-like Neighboring gene Elongator complex protein 6 Neighboring gene pyruvate kinase-like Neighboring gene short neuropeptide F-like Neighboring gene uncharacterized LOC100879507 Neighboring gene frataxin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003797054.1 Unplaced Scaffold Reference MROT_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    jerky protein homolog-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MROT_1.0

    Genomic

    1. NW_003797054.1 Reference MROT_1.0

      Range
      653633..655733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012285535.1 → XP_012140925.1  jerky protein homolog-like

      Related
      XP_012140925.1, XM_012285535.1
      Conserved Domains (3) summary
      pfam03221
      Location:81 → 140
      HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
      cl21459
      Location:8 → 58
      HTH; Helix-turn-helix domains
      cl21549
      Location:204 → 384
      rve; Integrase core domain
    Nucleotide Protein
    Heading Accession and Version

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