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    LOC105648371 ubiquitin-conjugating enzyme E2 10 [ Jatropha curcas ]

    Gene ID: 105648371, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC105648371
    Gene description
    ubiquitin-conjugating enzyme E2 10
    Locus tag
    JCGZ_26012
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Jatropha curcas
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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    Genomic context

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    See LOC105648371 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023591229.1 (264659..267443)
    101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012125302.1 (737790..741869, complement)

    NW_023591229.1Genomic Context describing neighboring genes Neighboring gene probable inactive receptor kinase At4g23740 Neighboring gene myosin IB heavy chain Neighboring gene ethylene-responsive transcription factor CRF4 Neighboring gene plastid division protein PDV1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Yeast functional screen to identify genetic determinants capable of conferring abiotic stress tolerance in Jatropha curcas. Eswaran N, et al. BMC Biotechnol, 2010 Mar 20. PMID 20302659, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-conjugating enzyme E2 10
    Names
    ubiquitin conjugating enzyme 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001308816.1 → NP_001295745.1  ubiquitin-conjugating enzyme E2 10

      See identical proteins and their annotated locations for NP_001295745.1

      Status: PROVISIONAL

      Source sequence(s)
      FJ619049
      UniProtKB/TrEMBL
      D3GC05
      Conserved Domains (1) summary
      cl00154
      Location:1 → 146
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

    RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RJC1_Hi-C Primary Assembly

    Genomic

    1. NW_023591229.1 Reference RJC1_Hi-C Primary Assembly

      Range
      264659..267443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012234737.3 → XP_012090127.1  ubiquitin-conjugating enzyme E2 10 isoform X1

      See identical proteins and their annotated locations for XP_012090127.1

      UniProtKB/TrEMBL
      D3GC05
      Conserved Domains (1) summary
      cl00154
      Location:1 → 146
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
    Nucleotide Protein
    Heading Accession and Version

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