sdhd.L succinate dehydrogenase complex subunit D, integral membrane protein L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: sdhd.L
Official Full Name: succinate dehydrogenase complex subunit D, integral membrane protein L homeolog
Primary source: Xenbase:XB-GENE-5855323
Locus tag: XELAEV_18035507mg
See related: EnsemblRapid:ENSXLAG00005012338
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: pgl; cbt1; pgl1; sdh4; sdhd; CybS-B; sdhd-a; sdhd-b
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Genomic context

Location:: chromosome: 7L

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	7L	NC_054383.1 (86654595..86662127)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	7L	NC_030736.1 (78059261..78066793)

Chromosome 7L - NC_054383.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables heme binding	IEA Inferred from Electronic Annotation more info
enables heme binding	ISS Inferred from Sequence or Structural Similarity more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables protein transmembrane transporter activity	IEA Inferred from Electronic Annotation more info
enables succinate dehydrogenase (quinone) activity	IEA Inferred from Electronic Annotation more info
enables ubiquinone binding	IEA Inferred from Electronic Annotation more info
enables ubiquinone binding	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within mitochondrial electron transport, succinate to ubiquinone	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein insertion into mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within tricarboxylic acid cycle	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of TIM22 mitochondrial import inner membrane insertion complex	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial envelope	IEA Inferred from Electronic Annotation more info
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial inner membrane	ISS Inferred from Sequence or Structural Similarity more info
part_of mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	IEA Inferred from Electronic Annotation more info
part_of mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	ISS Inferred from Sequence or Structural Similarity more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial

Names: Succinate dehydrogenase complex subunit D-B; Succinate-ubiquinone oxidoreductase cytochrome b small subunit B; Succinate-ubiquinone reductase membrane anchor subunit B; succinate dehydrogenase complex, subunit D, integral membrane protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001095520.1 → NP_001088989.1 succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial

See identical proteins and their annotated locations for NP_001088989.1

Status: PROVISIONAL

Source sequence(s)

BC077199

UniProtKB/Swiss-Prot

Q6AZV0

UniProtKB/TrEMBL

A0A974HC63

Related

ENSXLAP00005036171.1, ENSXLAT00005037071.1

Conserved Domains (1) summary

cd03496
Location:53 → 151

SQR_TypeC_CybS; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Eukaryotic SQRs reduce high potential quinones such as ubiquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric ...