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    FERMT2 FERM domain containing kindlin 2 [ Condylura cristata (star-nosed mole) ]

    Gene ID: 101627021, updated on 8-Mar-2024

    Summary

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    Gene symbol
    FERMT2
    Gene description
    FERM domain containing kindlin 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Condylura cristata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura
    Orthologs
    human mouse all
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    Genomic context

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    See FERMT2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    101 current ConCri1.0 (GCF_000260355.1) Unplaced Scaffold NW_004567114.1 (36557289..36619438)

    NW_004567114.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S3a pseudogene Neighboring gene DDHD domain containing 1 Neighboring gene uncharacterized LOC105853592 Neighboring gene glucosamine-phosphate N-acetyltransferase 1 Neighboring gene serine/threonine/tyrosine interacting protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004567114.1 Unplaced Scaffold Reference ConCri1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables integrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-matrix adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in integrin-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extrinsic component of cytoplasmic side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fermitin family homolog 2
    Names
    fermitin family member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Condylura cristata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ConCri1.0

    Genomic

    1. NW_004567114.1 Reference ConCri1.0

      Range
      36557289..36619438
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012724534.1 → XP_012579988.1  fermitin family homolog 2 isoform X1

      See identical proteins and their annotated locations for XP_012579988.1

      Conserved Domains (6) summary
      smart00295
      Location:252 → 335
      B41; Band 4.1 homologues
      cd01237
      Location:384 → 508
      PH_fermitin; Fermitin family pleckstrin homology (PH) domain
      pfam00169
      Location:392 → 487
      PH; PH domain
      pfam00373
      Location:520 → 591
      FERM_M; FERM central domain
      cl09511
      Location:294 → 337
      FERM_B-lobe; FERM domain B-lobe
      cl17171
      Location:585 → 676
      PH-like; Pleckstrin homology-like domain

    2. XM_012724535.1 → XP_012579989.1  fermitin family homolog 2 isoform X4

      See identical proteins and their annotated locations for XP_012579989.1

      Conserved Domains (4) summary
      cd01237
      Location:373 → 497
      PH_fermitin; Fermitin family pleckstrin homology (PH) domain
      pfam00169
      Location:381 → 476
      PH; PH domain
      pfam00373
      Location:509 → 573
      FERM_M; FERM central domain
      cl17171
      Location:567 → 658
      PH-like; Pleckstrin homology-like domain

    3. XM_012724532.1 → XP_012579986.1  fermitin family homolog 2 isoform X1

      See identical proteins and their annotated locations for XP_012579986.1

      Conserved Domains (6) summary
      smart00295
      Location:252 → 335
      B41; Band 4.1 homologues
      cd01237
      Location:384 → 508
      PH_fermitin; Fermitin family pleckstrin homology (PH) domain
      pfam00169
      Location:392 → 487
      PH; PH domain
      pfam00373
      Location:520 → 591
      FERM_M; FERM central domain
      cl09511
      Location:294 → 337
      FERM_B-lobe; FERM domain B-lobe
      cl17171
      Location:585 → 676
      PH-like; Pleckstrin homology-like domain

    4. XM_012724533.1 → XP_012579987.1  fermitin family homolog 2 isoform X2

      Conserved Domains (5) summary
      smart00295
      Location:252 → 335
      B41; Band 4.1 homologues
      cd01237
      Location:384 → 508
      PH_fermitin; Fermitin family pleckstrin homology (PH) domain
      pfam00169
      Location:392 → 487
      PH; PH domain
      pfam00373
      Location:520 → 584
      FERM_M; FERM central domain
      cl17171
      Location:578 → 669
      PH-like; Pleckstrin homology-like domain

    5. XM_004681863.2 → XP_004681920.1  fermitin family homolog 2 isoform X3

      Conserved Domains (5) summary
      cd01237
      Location:373 → 497
      PH_fermitin; Fermitin family pleckstrin homology (PH) domain
      pfam00169
      Location:381 → 476
      PH; PH domain
      pfam00373
      Location:509 → 580
      FERM_M; FERM central domain
      cl09511
      Location:283 → 326
      FERM_B-lobe; FERM domain B-lobe
      cl17171
      Location:574 → 665
      PH-like; Pleckstrin homology-like domain

    6. XM_004681864.2 → XP_004681921.1  fermitin family homolog 2 isoform X4

      See identical proteins and their annotated locations for XP_004681921.1

      Conserved Domains (4) summary
      cd01237
      Location:373 → 497
      PH_fermitin; Fermitin family pleckstrin homology (PH) domain
      pfam00169
      Location:381 → 476
      PH; PH domain
      pfam00373
      Location:509 → 573
      FERM_M; FERM central domain
      cl17171
      Location:567 → 658
      PH-like; Pleckstrin homology-like domain

    7. XM_012724531.1 → XP_012579985.1  fermitin family homolog 2 isoform X1

      See identical proteins and their annotated locations for XP_012579985.1

      Conserved Domains (6) summary
      smart00295
      Location:252 → 335
      B41; Band 4.1 homologues
      cd01237
      Location:384 → 508
      PH_fermitin; Fermitin family pleckstrin homology (PH) domain
      pfam00169
      Location:392 → 487
      PH; PH domain
      pfam00373
      Location:520 → 591
      FERM_M; FERM central domain
      cl09511
      Location:294 → 337
      FERM_B-lobe; FERM domain B-lobe
      cl17171
      Location:585 → 676
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

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