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    LOC105354756 gastrin/cholecystokinin-like peptide [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 105354756, updated on 13-Mar-2024

    Summary

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    Gene symbol
    LOC105354756
    Gene description
    gastrin/cholecystokinin-like peptide
    See related
    EnsemblRapid:ENSORLG00000012551
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Also known as
    GAST; gastrin
    Orthologs
    zebrafish all
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    Genomic context

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    See LOC105354756 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 1 NC_019859.2 (29239862..29240973, complement)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 1 NC_019859.1 (28913000..28914109, complement)

    Chromosome 1 - NC_019859.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110015511 Neighboring gene huntingtin associated protein 1 Neighboring gene keratin, type I cytoskeletal 19 Neighboring gene uncharacterized LOC105354760

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables neuropeptide hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in digestion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gastrin/cholecystokinin-like peptide; uncharacterized protein LOC105354756

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019859.2 Reference ASM223467v1 Primary Assembly

      Range
      29239862..29240973 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011479356.3 → XP_011477658.2  gastrin/cholecystokinin-like peptide isoform X1

      UniProtKB/TrEMBL
      A0A0M4JAV4, H2MAZ6
      Related
      ENSORLP00000015710.2, ENSORLT00000015711.3
      Conserved Domains (1) summary
      cl27628
      Location:82 → 98
      Gastrin; Gastrin/cholecystokinin family

    2. XM_011479358.3 → XP_011477660.2  uncharacterized protein LOC105354756 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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