U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC106515104 myosin-10-like [ Austrofundulus limnaeus ]

    Gene ID: 106515104, updated on 19-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC106515104
    Gene description
    myosin-10-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Austrofundulus limnaeus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
    Annotation information
    Annotation category: partial on reference assembly
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC106515104 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952428.1 (1426489..1455698)

    NW_013952428.1Genomic Context describing neighboring genes Neighboring gene urotensin-2 receptor-like Neighboring gene potassium inwardly rectifying channel subfamily J member 14 Neighboring gene uncharacterized LOC106515060 Neighboring gene transmembrane protein 67

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_013952428.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microfilament motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle transport along actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    myosin-10-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Austrofundulus_limnaeus-1.0

    Genomic

    1. NW_013952428.1 Reference Austrofundulus_limnaeus-1.0

      Range
      1426489..1455698
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014004729.1 → XP_013860183.1  myosin-10-like isoform X1

      UniProtKB/TrEMBL
      A0A2I4AXF4
      Conserved Domains (3) summary
      cd14920
      Location:110 → 832
      MYSc_Myh10; class II myosin heavy chain 10, motor domain
      pfam00063
      Location:98 → 832
      Myosin_head; Myosin head (motor domain)
      pfam02736
      Location:45 → 79
      Myosin_N; Myosin N-terminal SH3-like domain

    2. XM_014004734.1 → XP_013860188.1  myosin-10-like isoform X5

      UniProtKB/TrEMBL
      A0A2I4AXF7
      Conserved Domains (3) summary
      cd14920
      Location:110 → 809
      MYSc_Myh10; class II myosin heavy chain 10, motor domain
      pfam00063
      Location:98 → 809
      Myosin_head; Myosin head (motor domain)
      pfam02736
      Location:45 → 79
      Myosin_N; Myosin N-terminal SH3-like domain

    3. XM_014004730.1 → XP_013860184.1  myosin-10-like isoform X2

      UniProtKB/TrEMBL
      A0A2I4AXI6
      Conserved Domains (3) summary
      cd14920
      Location:110 → 828
      MYSc_Myh10; class II myosin heavy chain 10, motor domain
      pfam00063
      Location:98 → 828
      Myosin_head; Myosin head (motor domain)
      pfam02736
      Location:45 → 79
      Myosin_N; Myosin N-terminal SH3-like domain

    4. XM_014004731.1 → XP_013860185.1  myosin-10-like isoform X3

      UniProtKB/TrEMBL
      A0A2I4AXH4
      Conserved Domains (3) summary
      cd14920
      Location:110 → 816
      MYSc_Myh10; class II myosin heavy chain 10, motor domain
      pfam00063
      Location:98 → 816
      Myosin_head; Myosin head (motor domain)
      pfam02736
      Location:45 → 79
      Myosin_N; Myosin N-terminal SH3-like domain

    5. XM_014004732.1 → XP_013860186.1  myosin-10-like isoform X4

      UniProtKB/TrEMBL
      A0A2I4AXI0
      Conserved Domains (3) summary
      cd14920
      Location:110 → 812
      MYSc_Myh10; class II myosin heavy chain 10, motor domain
      pfam00063
      Location:98 → 812
      Myosin_head; Myosin head (motor domain)
      pfam02736
      Location:45 → 79
      Myosin_N; Myosin N-terminal SH3-like domain

    6. XM_014004735.1 → XP_013860189.1  myosin-10-like isoform X6

      UniProtKB/TrEMBL
      A0A2I4AXJ0
      Conserved Domains (3) summary
      cd14920
      Location:110 → 789
      MYSc_Myh10; class II myosin heavy chain 10, motor domain
      pfam00063
      Location:98 → 789
      Myosin_head; Myosin head (motor domain)
      pfam02736
      Location:45 → 79
      Myosin_N; Myosin N-terminal SH3-like domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases