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    PASHI_RS03545 EF-hand domain-containing protein [ Pseudoalteromonas shioyasakiensis ]

    Gene ID: 29848162, updated on 3-Apr-2024

    Summary

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    Gene symbol
    PASHI_RS03545
    Gene description
    EF-hand domain-containing protein
    Locus tag
    PASHI_RS03545
    Gene type
    protein coding
    Organism
    Pseudoalteromonas shioyasakiensis (strain: JCM 18891, type-material: type strain of Pseudoalteromonas shioyasakiensis)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas
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    Genomic context

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    NZ_LRUE01000006.1Genomic Context describing neighboring genes Neighboring gene calmodulin Neighboring gene calmodulin Neighboring gene Trk system potassium transporter TrkA Neighboring gene 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB Neighboring gene methionyl-tRNA formyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_LRUE01000006.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The EF-hand family of calcium-modulated proteins. Persechini A, et al. Trends Neurosci, 1989 Nov. PMID 2479149
    2. Classification and evolution of EF-hand proteins. Kawasaki H, et al. Biometals, 1998 Dec. PMID 10191494

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    EF-hand domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_LRUE01000006.1 Reference assembly

      Range
      47347..47565
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_054563774.1 MULTISPECIES: EF-hand domain-containing protein [Pseudoalteromonas]

      UniProtKB/TrEMBL
      A0A0N8TXR1, A0A973I2F0
      Conserved Domains (1) summary
      cd00051
      Location:26 → 71
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    Nucleotide Protein
    Heading Accession and Version