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    nup155 nucleoporin 155 [ Lepisosteus oculatus (spotted gar) ]

    Gene ID: 102682755, updated on 10-Mar-2024

    Summary

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    Gene symbol
    nup155
    Gene description
    nucleoporin 155
    See related
    Ensembl:ENSLOCG00000012677
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lepisosteus oculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
    Orthologs
    human zebrafish all
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    Genomic context

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    See nup155 in Genome Data Viewer
    Location:
    chromosome: LG2
    Exon count:
    40
    Annotation release Status Assembly LG Location
    101 current LepOcu1 (GCF_000242695.1) LG2 NC_023180.1 (53960672..53989705)

    Linkage Group LG2 - NC_023180.1Genomic Context describing neighboring genes Neighboring gene glial cell derived neurotrophic factor Neighboring gene WD repeat domain 70 Neighboring gene neuropeptide Y receptor type 6-like Neighboring gene ciliogenesis and planar polarity effector 1 Neighboring gene NIPBL cohesin loading factor a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_023180.1 Chromosome LG2 Reference LepOcu1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to nuclear inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nuclear pore inner ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear pore complex protein Nup155

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LepOcu1 Primary Assembly

    Genomic

    1. NC_023180.1 Reference LepOcu1 Primary Assembly

      Range
      53960672..53989705
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015340376.1 → XP_015195862.1  nuclear pore complex protein Nup155

      UniProtKB/TrEMBL
      W5N4Q5
      Related
      ENSLOCP00000015614.1, ENSLOCT00000015643.1
      Conserved Domains (3) summary
      pfam03177
      Location:833 → 1190
      Nucleoporin_C; Non-repetitive/WGA-negative nucleoporin C-terminal
      pfam08801
      Location:72 → 508
      Nucleoporin_N; Nup133 N terminal like
      pfam11914
      Location:578 → 643
      DUF3432; Domain of unknown function (DUF3432)

    2. XM_015340377.1 → XP_015195863.1  nuclear pore complex protein Nup155

      UniProtKB/TrEMBL
      W5N4Q5
      Conserved Domains (3) summary
      pfam03177
      Location:833 → 1190
      Nucleoporin_C; Non-repetitive/WGA-negative nucleoporin C-terminal
      pfam08801
      Location:72 → 508
      Nucleoporin_N; Nup133 N terminal like
      pfam11914
      Location:578 → 643
      DUF3432; Domain of unknown function (DUF3432)

    3. XM_015340378.1 → XP_015195864.1  nuclear pore complex protein Nup155

      UniProtKB/TrEMBL
      W5N4Q5
      Conserved Domains (3) summary
      pfam03177
      Location:833 → 1190
      Nucleoporin_C; Non-repetitive/WGA-negative nucleoporin C-terminal
      pfam08801
      Location:72 → 508
      Nucleoporin_N; Nup133 N terminal like
      pfam11914
      Location:578 → 643
      DUF3432; Domain of unknown function (DUF3432)

    4. XM_015340379.1 → XP_015195865.1  nuclear pore complex protein Nup155

      UniProtKB/TrEMBL
      W5N4Q5
      Conserved Domains (3) summary
      pfam03177
      Location:833 → 1190
      Nucleoporin_C; Non-repetitive/WGA-negative nucleoporin C-terminal
      pfam08801
      Location:72 → 508
      Nucleoporin_N; Nup133 N terminal like
      pfam11914
      Location:578 → 643
      DUF3432; Domain of unknown function (DUF3432)

    RNA

    1. XR_001477761.1 RNA Sequence

    2. XR_001477762.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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