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    SEMA4B semaphorin 4B [ Myotis davidii ]

    Gene ID: 102763035, updated on 30-Mar-2024

    Summary

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    Gene symbol
    SEMA4B
    Gene description
    semaphorin 4B
    Locus tag
    MDA_GLEAN10006759
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myotis davidii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See SEMA4B in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006295053.1 (234329..265915)

    NW_006295053.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107184070 Neighboring gene uncharacterized LOC107184069 Neighboring gene calcium and integrin binding 1 Neighboring gene GDP-D-glucose phosphorylase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006295053.1 Unplaced Scaffold Reference ASM32734v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemorepellent activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables semaphorin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of axon extension involved in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neural crest cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in semaphorin-plexin signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: semaphorin-4B
    Names
    Semaphorin-4B
    sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM32734v1

    Genomic

    1. NW_006295053.1 Reference ASM32734v1

      Range
      234329..265915
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015567731.1 → XP_015423217.1  LOW QUALITY PROTEIN: semaphorin-4B

      UniProtKB/TrEMBL
      L5LIM8
      Conserved Domains (3) summary
      cd05872
      Location:574 → 656
      Ig_Sema4B_like; Immunoglobulin (Ig)-like domain of the class IV semaphorin Sema4B
      pfam01437
      Location:505 → 551
      PSI; Plexin repeat
      cl15693
      Location:63 → 504
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
    Nucleotide Protein
    Heading Accession and Version

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