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    ZBTB2 zinc finger and BTB domain containing 2 [ Acanthisitta chloris (rifleman) ]

    Gene ID: 103810439, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ZBTB2
    Gene description
    zinc finger and BTB domain containing 2
    Locus tag
    N310_00082
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acanthisitta chloris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Acanthisittidae; Acanthisitta
    Orthologs
    human mouse all
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    Genomic context

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    See ZBTB2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008703543.1 (1..4252, complement)

    NW_008703543.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008703543.1 Unplaced Scaffold Reference ASM69581v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and BTB domain-containing protein 2
    Names
    Zinc finger and BTB domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69581v1

    Genomic

    1. NW_008703543.1 Reference ASM69581v1

      Range
      1..4252 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009083335.1 → XP_009081583.1  zinc finger and BTB domain-containing protein 2

      Conserved Domains (6) summary
      smart00225
      Location:36 → 95
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00355
      Location:265 → 287
      ZnF_C2H2; zinc finger
      sd00017
      Location:374 → 394
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:372 → 394
      zf-C2H2; Zinc finger, C2H2 type
      pfam00651
      Location:25 → 120
      BTB; BTB/POZ domain
      pfam13465
      Location:386 → 408
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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