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    ZDHHC16 zinc finger DHHC-type palmitoyltransferase 16 [ Parus major (Great Tit) ]

    Gene ID: 107206696, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ZDHHC16
    Gene description
    zinc finger DHHC-type palmitoyltransferase 16
    See related
    Ensembl:ENSPMJG00000004117
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parus major
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
    Orthologs
    human mouse all
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    Genomic context

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    See ZDHHC16 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current Parus_major1.1 (GCF_001522545.3) 6 NC_031775.1 (20490708..20501232, complement)
    100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 6 NC_029275.1 (19489079..19495263, complement)

    Chromosome 6 - NC_031775.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 2 Neighboring gene ubiquitin domain containing 1 Neighboring gene MMS19 homolog, cytosolic iron-sulfur assembly component Neighboring gene exosome component 1 Neighboring gene phosphoglycerate mutase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein palmitoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    palmitoyltransferase ZDHHC16
    Names
    zinc finger DHHC-type containing 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Parus_major1.1 Primary Assembly

    Genomic

    1. NC_031775.1 Reference Parus_major1.1 Primary Assembly

      Range
      20490708..20501232 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033515859.1 → XP_033371750.1  palmitoyltransferase ZDHHC16 isoform X7

      Conserved Domains (1) summary
      pfam01529
      Location:168 → 313
      DHHC; DHHC palmitoyltransferase

    2. XM_033515854.1 → XP_033371745.1  palmitoyltransferase ZDHHC16 isoform X1

      Conserved Domains (1) summary
      pfam01529
      Location:223 → 368
      DHHC; DHHC palmitoyltransferase

    3. XM_033515856.1 → XP_033371747.1  palmitoyltransferase ZDHHC16 isoform X3

      Conserved Domains (1) summary
      pfam01529
      Location:223 → 352
      DHHC; DHHC palmitoyltransferase

    4. XM_033515858.1 → XP_033371749.1  palmitoyltransferase ZDHHC16 isoform X4

      Conserved Domains (1) summary
      pfam01529
      Location:223 → 368
      DHHC; DHHC palmitoyltransferase

    5. XM_033515855.1 → XP_033371746.1  palmitoyltransferase ZDHHC16 isoform X2

      Conserved Domains (1) summary
      pfam01529
      Location:223 → 368
      DHHC; DHHC palmitoyltransferase

    6. XM_015632711.3 → XP_015488197.1  palmitoyltransferase ZDHHC16 isoform X5

      Related
      ENSPMJP00000004776.1, ENSPMJT00000006679.1
      Conserved Domains (1) summary
      pfam01529
      Location:222 → 368
      zf-DHHC; DHHC palmitoyltransferase

    7. XM_015632714.3 → XP_015488200.1  palmitoyltransferase ZDHHC16 isoform X6

      Related
      ENSPMJP00000004785.1, ENSPMJT00000006697.1
      Conserved Domains (1) summary
      pfam01529
      Location:222 → 352
      zf-DHHC; DHHC palmitoyltransferase

    8. XM_033515860.1 → XP_033371751.1  palmitoyltransferase ZDHHC16 isoform X8

      Conserved Domains (1) summary
      cl19890
      Location:155 → 243
      DHHC; DHHC palmitoyltransferase
    Nucleotide Protein
    Heading Accession and Version

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