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    PVX_117030 RNA helicase-1, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

    Gene ID: 5474999, updated on 5-Sep-2024

    Summary

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    Gene symbol
    PVX_117030
    Gene description
    RNA helicase-1, putative
    Locus tag
    PVX_117030
    See related
    PlasmoDB:PVX_117030; VEuPathDB:PVX_117030
    Gene type
    protein coding
    RNA name
    RNA helicase-1, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium vivax (strain: Salvador I)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
    Orthologs
    Plasmodium falciparum all
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    Genomic context

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    See PVX_117030 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    6
    Sequence:
    Chromosome: 12; NC_009917.1 (1473013..1476729, complement)

    Chromosome 12 - NC_009917.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene U2 snRNP auxiliary factor, putative Neighboring gene hypothetical protein Neighboring gene derlin-2, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009917.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA helicase-1, putative
    XP_001615701.1
    • encoded by transcript PVX_117030A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009917.1 Reference assembly

      Range
      1473013..1476729 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001615651.1 → XP_001615701.1  RNA helicase-1, putative [Plasmodium vivax]

      See identical proteins and their annotated locations for XP_001615701.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0J9S6Y0, A0A0J9SPL0, A0A0J9T7S4, A0A0J9TRV9, A0A1G4HH16, A5K370
      Conserved Domains (1) summary
      PTZ00424
      Location:1 → 398
      PTZ00424; helicase 45; Provisional
    Nucleotide Protein
    Heading Accession and Version

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