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    LOC6573909 uncharacterized LOC6573909 [ Drosophila mojavensis ]

    Gene ID: 6573909, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6573909
    Gene description
    uncharacterized LOC6573909
    Locus tag
    Dmoj_GI22789
    See related
    EnsemblRapid:LOC6573909
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila mojavensis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Also known as
    GI22789; GI22789-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6573909 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current ASM1815372v1 (GCF_018153725.1) Unplaced Scaffold NW_025318822.1 (59934..61245, complement)
    101 previous assembly dmoj_caf1 (GCF_000005175.2) Unplaced Scaffold NW_001979112.1 (18644266..18645577, complement)

    NW_025318822.1Genomic Context describing neighboring genes Neighboring gene palmitoyltransferase ZDHHC6 Neighboring gene xaa-Pro dipeptidase Neighboring gene protein partner of snf Neighboring gene c-Myc-binding protein homolog Neighboring gene Protein phosphatase 1 at 87B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in muscle organ development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of sarcoglycan complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC6573909
    Names
    Dmoj\GI22789
    Dmoj\GI22789-PA
    dmoj_GLEANR_7977

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila mojavensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815372v1

    Genomic

    1. NW_025318822.1 Reference ASM1815372v1

      Range
      59934..61245 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001999932.3 → XP_001999968.3  uncharacterized protein LOC6573909

      UniProtKB/TrEMBL
      B4K875
      Related
      XP_001999968.3, XM_001999932.3
      Conserved Domains (1) summary
      pfam04790
      Location:69 → 330
      Sarcoglycan_1; Sarcoglycan complex subunit protein
    Nucleotide Protein
    Heading Accession and Version

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