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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001287491.2 → NP_001274420.1 methylcytosine dioxygenase TET3 isoform 1
See identical proteins and their annotated locations for NP_001274420.1
Status: VALIDATED
- Source sequence(s)
-
AC073046, AC073263, AI438961, HQ220209
- Consensus CDS
-
CCDS46339.2
- UniProtKB/Swiss-Prot
- A6NEI3, J3KNF3, K9JJH7, O43151, Q86Z24, Q8TBM9
- Related
- ENSP00000386869.3, ENST00000409262.8
- Conserved Domains (4) summary
-
- PHA03247
Location:383 → 752
- PHA03247; large tegument protein UL36; Provisional
- pfam02008
Location:50 → 89
- zf-CXXC; CXXC zinc finger domain
- cd18897
Location:828 → 1152
- TET3; oxygenase domain of ten-eleven translocation (TET)3 methylcytosine dioxygenase and similar proteins
- cl40427
Location:1638 → 1766
- Tet_JBP; oxygenase domain of ten-eleven translocation (TET) enzymes, J-binding proteins (JBPs), and similar proteins
-
NM_001366022.1 → NP_001352951.1 methylcytosine dioxygenase TET3 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC073263, AC110801
- Consensus CDS
-
CCDS92780.1
- UniProtKB/TrEMBL
-
A0A5H1ZRP3
- Related
- ENSP00000307803.8, ENST00000305799.9
- Conserved Domains (3) summary
-
- PHA03247
Location:290 → 659
- PHA03247; large tegument protein UL36; Provisional
- cd18897
Location:735 → 1059
- TET3; oxygenase domain of ten-eleven translocation (TET)3 methylcytosine dioxygenase and similar proteins
- cl40427
Location:1545 → 1673
- Tet_JBP; oxygenase domain of ten-eleven translocation (TET) enzymes, J-binding proteins (JBPs), and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
73983631..74135498
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011532683.3 → XP_011530985.1 methylcytosine dioxygenase TET3 isoform X1
See identical proteins and their annotated locations for XP_011530985.1
- Conserved Domains (2) summary
-
- pfam02008
Location:50 → 89
- zf-CXXC; CXXC zinc finger domain
- pfam12851
Location:985 → 1128
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
-
XM_047443659.1 → XP_047299615.1 methylcytosine dioxygenase TET3 isoform X2
- UniProtKB/Swiss-Prot
- A6NEI3, J3KNF3, K9JJH7, O43151, Q86Z24, Q8TBM9
-
XM_017003566.2 → XP_016859055.1 methylcytosine dioxygenase TET3 isoform X1
- Conserved Domains (2) summary
-
- pfam02008
Location:50 → 89
- zf-CXXC; CXXC zinc finger domain
- pfam12851
Location:985 → 1128
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
-
XM_011532684.3 → XP_011530986.1 methylcytosine dioxygenase TET3 isoform X1
See identical proteins and their annotated locations for XP_011530986.1
- Conserved Domains (2) summary
-
- pfam02008
Location:50 → 89
- zf-CXXC; CXXC zinc finger domain
- pfam12851
Location:985 → 1128
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
-
XM_011532682.3 → XP_011530984.1 methylcytosine dioxygenase TET3 isoform X1
See identical proteins and their annotated locations for XP_011530984.1
- Conserved Domains (2) summary
-
- pfam02008
Location:50 → 89
- zf-CXXC; CXXC zinc finger domain
- pfam12851
Location:985 → 1128
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
-
XM_011532685.3 → XP_011530987.1 methylcytosine dioxygenase TET3 isoform X3
- Conserved Domains (2) summary
-
- pfam02008
Location:50 → 89
- zf-CXXC; CXXC zinc finger domain
- pfam12851
Location:966 → 1109
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
-
XM_047443660.1 → XP_047299616.1 methylcytosine dioxygenase TET3 isoform X2
- UniProtKB/Swiss-Prot
- A6NEI3, J3KNF3, K9JJH7, O43151, Q86Z24, Q8TBM9
-
XM_024452745.2 → XP_024308513.1 methylcytosine dioxygenase TET3 isoform X6
- Conserved Domains (3) summary
-
- pfam02008
Location:50 → 89
- zf-CXXC; CXXC zinc finger domain
- pfam12851
Location:985 → 1105
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
- cl26464
Location:383 → 752
- Atrophin-1; Atrophin-1 family
-
XM_024452746.2 → XP_024308514.1 methylcytosine dioxygenase TET3 isoform X7
- Conserved Domains (3) summary
-
- pfam02008
Location:50 → 89
- zf-CXXC; CXXC zinc finger domain
- pfam12851
Location:985 → 1089
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
- cl26464
Location:383 → 752
- Atrophin-1; Atrophin-1 family
-
XM_011532688.3 → XP_011530990.1 methylcytosine dioxygenase TET3 isoform X8
- Conserved Domains (2) summary
-
- pfam02008
Location:50 → 89
- zf-CXXC; CXXC zinc finger domain
- pfam12851
Location:985 → 1045
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
-
XM_047443662.1 → XP_047299618.1 methylcytosine dioxygenase TET3 isoform X4
-
XM_011532690.2 → XP_011530992.1 methylcytosine dioxygenase TET3 isoform X9
See identical proteins and their annotated locations for XP_011530992.1
- Conserved Domains (3) summary
-
- pfam05956
Location:520 → 644
- APC_basic; APC basic domain
- pfam12851
Location:127 → 270
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
- cl00109
Location:418 → 553
- MADS; MADS: MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptonal regulators. Binds DNA and exists as hetero and homo-dimers. Composed of 2 main subgroups: SRF-like/Type I and MEF2-like (myocyte enhancer factor 2)/ ...
-
XM_011532687.3 → XP_011530989.1 methylcytosine dioxygenase TET3 isoform X5
- Conserved Domains (1) summary
-
- pfam12851
Location:892 → 1035
- Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
-
XM_047443664.1 → XP_047299620.1 methylcytosine dioxygenase TET3 isoform X9
- Related
- ENSP00000520736.1, ENST00000718303.1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
73991778..74143844
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054340950.1 → XP_054196925.1 methylcytosine dioxygenase TET3 isoform X1
-
XM_054340953.1 → XP_054196928.1 methylcytosine dioxygenase TET3 isoform X2
- UniProtKB/Swiss-Prot
- A6NEI3, J3KNF3, K9JJH7, O43151, Q86Z24, Q8TBM9
-
XM_054340951.1 → XP_054196926.1 methylcytosine dioxygenase TET3 isoform X1
-
XM_054340952.1 → XP_054196927.1 methylcytosine dioxygenase TET3 isoform X1
-
XM_054340959.1 → XP_054196934.1 methylcytosine dioxygenase TET3 isoform X7
-
XM_054340958.1 → XP_054196933.1 methylcytosine dioxygenase TET3 isoform X6
-
XM_054340949.1 → XP_054196924.1 methylcytosine dioxygenase TET3 isoform X1
-
XM_054340955.1 → XP_054196930.1 methylcytosine dioxygenase TET3 isoform X3
-
XM_054340956.1 → XP_054196931.1 methylcytosine dioxygenase TET3 isoform X4
-
XM_054340960.1 → XP_054196935.1 methylcytosine dioxygenase TET3 isoform X8
-
XM_054340954.1 → XP_054196929.1 methylcytosine dioxygenase TET3 isoform X2
- UniProtKB/Swiss-Prot
- A6NEI3, J3KNF3, K9JJH7, O43151, Q86Z24, Q8TBM9
-
XM_054340962.1 → XP_054196937.1 methylcytosine dioxygenase TET3 isoform X9
-
XM_054340957.1 → XP_054196932.1 methylcytosine dioxygenase TET3 isoform X5
-
XM_054340961.1 → XP_054196936.1 methylcytosine dioxygenase TET3 isoform X9