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    CACUL1 CDK2 associated cullin domain 1 [ Homo sapiens (human) ]

    Gene ID: 143384, updated on 2-Nov-2024

    Summary

    Official Symbol
    CACUL1provided by HGNC
    Official Full Name
    CDK2 associated cullin domain 1provided by HGNC
    Primary source
    HGNC:HGNC:23727
    See related
    Ensembl:ENSG00000151893 MIM:618764; AllianceGenome:HGNC:23727
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CAC1; C10orf46
    Summary
    Enables protein kinase binding activity. Involved in G1/S transition of mitotic cell cycle; positive regulation of cell population proliferation; and positive regulation of protein kinase activity. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in testis (RPKM 11.0), bone marrow (RPKM 9.1) and 25 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See CACUL1 in Genome Data Viewer
    Location:
    10q26.11
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (118676411..118754970, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (119571544..119650196, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (120435923..120514482, complement)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:120354119-120354927 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:120354928-120355736 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120355737-120356545 Neighboring gene prolactin releasing hormone receptor Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120394958-120395458 Neighboring gene TOMM22 pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4103 Neighboring gene Sharpr-MPRA regulatory region 11808 Neighboring gene uncharacterized LOC107987151 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr10:120554781-120555336 Neighboring gene long intergenic non-protein coding RNA 3036 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120568144-120568912 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120568913-120569681 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120602961-120603462 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:120603463-120603962 Neighboring gene Sharpr-MPRA regulatory region 10884 Neighboring gene ribosomal protein L17 pseudogene 36

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ40409, MGC33215

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    CDK2-associated and cullin domain-containing protein 1
    Names
    Cdk-Associated Cullin1
    cdk-associated cullin 1
    cullin

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153810.5NP_722517.3  CDK2-associated and cullin domain-containing protein 1

      See identical proteins and their annotated locations for NP_722517.3

      Status: VALIDATED

      Source sequence(s)
      AJ544771, AL139407, AY743663, BU623607
      Consensus CDS
      CCDS41570.1
      UniProtKB/Swiss-Prot
      Q5XPL7, Q86Y37, Q8IY11, Q8N7S4
      Related
      ENSP00000358147.2, ENST00000369151.8
      Conserved Domains (1) summary
      pfam00888
      Location:138256
      Cullin; Cullin family

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      118676411..118754970 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      119571544..119650196 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)