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    LINC02760 long intergenic non-protein coding RNA 2760 [ Homo sapiens (human) ]

    Gene ID: 105376633, updated on 17-Sep-2024

    Summary

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    Official Symbol
    LINC02760provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2760provided by HGNC
    Primary source
    HGNC:HGNC:54280
    See related
    Ensembl:ENSG00000254516 AllianceGenome:HGNC:54280
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LINC02760 in Genome Data Viewer
    Location:
    11p12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (37938601..37954663)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (38083228..38099282)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (37960151..37976213)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376632 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:37526125-37527324 Neighboring gene ribosomal protein L7a pseudogene 56 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:37880455-37881030 Neighboring gene NANOG hESC enhancer GRCh37_chr11:37913389-37913890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:37989075-37989576 Neighboring gene NANOG hESC enhancer GRCh37_chr11:37990791-37991343 Neighboring gene NANOG hESC enhancer GRCh37_chr11:38070931-38071450 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:38132226-38133425 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:38134504-38135142 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:38173897-38174616 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:38190669-38191868 Neighboring gene uncharacterized LOC105376634 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:38272133-38272636 Neighboring gene DNAAF11 pseudogene 1 Neighboring gene MPRA-validated peak1259 silencer Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:38615819-38617018 Neighboring gene long intergenic non-protein coding RNA 2759

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_135110.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC103798, BX115137
      Related
      ENST00000532562.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      37938601..37954663
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      38083228..38099282
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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