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    H3P47 H3 histone pseudogene 47 [ Homo sapiens (human) ]

    Gene ID: 115482706, updated on 17-Sep-2024

    Summary

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    Official Symbol
    H3P47provided by HGNC
    Official Full Name
    H3 histone pseudogene 47provided by HGNC
    Primary source
    HGNC:HGNC:54475
    See related
    AllianceGenome:HGNC:54475
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    p57
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    Genomic context

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    See H3P47 in Genome Data Viewer
    Location:
    Xq25
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (123514360..123515070)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (121823090..121823800)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (122648211..122648921)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosome recycling factor pseudogene 1 Neighboring gene MPRA-validated peak7421 silencer Neighboring gene Sharpr-MPRA regulatory region 4549 Neighboring gene glutamate ionotropic receptor AMPA type subunit 3 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:122364489-122365428 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:122416639-122417140 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:122451941-122452481 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:122525440-122525940 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29908 Neighboring gene cytochrome c oxidase subunit NDUFA4-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:122695822-122696322 Neighboring gene tubulin beta 4A class IVa pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_066053.2 

      Range
      88..798
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      123514360..123515070
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      121823090..121823800
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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