Raoultella planticola (ID 11487) - Genome - NCBI

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Raoultella planticola
Representative genome: Raoultella planticola
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ID: 11487

Organism Overview ; Genome Assembly and Annotation report [81] ; Genome Tree report [44] ; Plasmid Annotation Report [51]

Raoultella planticola

Raoultella planticola overview

Lineage: Bacteria[37505]; Pseudomonadota[11106]; Gammaproteobacteria[4596]; Enterobacterales[798]; Enterobacteriaceae[395]; Klebsiella/Raoultella group[20]; Raoultella[4]; Raoultella planticola[1]

Summary

Sequence data:

genome assemblies: 81; sequence reads: 3

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 5.92985

median protein count: 5469

median GC%: 55.5

Publications (limited to 20 most recent records)

MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy. Rocha U, et al. Mol Ecol Resour 2024 Feb
Whole Genome Sequencing of an Extensively Drug-Resistant Raoultella planticola Isolate Containing bla(KPC-2), bla(NDM-1), and bla(CTX-M-15). Marini PVB, et al. Microb Drug Resist 2023 Sep
Snapshot of resistome, virulome and mobilome in aquaculture. Salgueiro V, et al. Sci Total Environ 2023 Dec 20
Emergence of rare carbapenemases (FRI, GES-5, IMI, SFC and SFH-1) in Enterobacterales isolated from surface waters in Japan. Gomi R, et al. J Antimicrob Chemother 2022 Apr 27
Pseudomonas campi sp. nov., a nitrate-reducing bacterium isolated from grassland soil. Timsy, et al. Int J Syst Evol Microbiol 2021 May
Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study. Cuénod A, et al. Genome Med 2021 Sep 13
MGnify: the microbiome analysis resource in 2020. Mitchell AL, et al. Nucleic Acids Res 2020 Jan 8
Flies from a tertiary hospital in Rwanda carry multidrug-resistant Gram-negative pathogens including extended-spectrum beta-lactamase-producing E. coli sequence type 131. Heiden SE, et al. Antimicrob Resist Infect Control 2020 Feb 17
FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science. Sichtig H, et al. Nat Commun 2019 Jul 25
Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland. Moradigaravand D, et al. mBio 2017 Feb 21
Screening for biosurfactant production by 2,4,6-trinitrotoluene-transforming bacteria. Avila-Arias H, et al. J Appl Microbiol 2017 Aug
Recent independent emergence of multiple multidrug-resistant Serratia marcescens clones within the United Kingdom and Ireland. Moradigaravand D, et al. Genome Res 2016 Aug
Architecture of Class 1, 2, and 3 Integrons from Gram Negative Bacteria Recovered among Fruits and Vegetables. Jones-Dias D, et al. Front Microbiol 2016
A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota. Roach DJ, et al. PLoS Genet 2015 Jul
Draft Genome Sequence of Raoultella ornithinolytica TNT, a Trinitrotoluene-Denitrating and Plant Growth-Promoting Strain Isolated from Explosive-Contaminated Soil. Thijs S, et al. Genome Announc 2014 May 29
Draft Genome Sequence of Raoultella planticola, Isolated from River Water. Jothikumar N, et al. Genome Announc 2014 Oct 16

Representative (genome information for reference and representative genomes)

Reference genome:

Raoultella planticola ASM2263759v1

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
Chr	-	NZ_CP093334.1	CP093334.1	5.65	55.7	5,164	25	85	13	5,376	89

Dendrogram (based on genomic BLAST)

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