Syngnathus typhle (ID 16639) - Genome - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Syngnathus typhle (broad-nosed pipefish)
Representative genome: Syngnathus typhle (assembly RoL_Styp_1.0)
Download sequences in FASTA format for genome, transcript, protein
Download genome annotation in GFF, GenBank format
BLAST against Syngnathus typhle genome
All 2 genomes for species:
Browse the list
Download sequence and annotation from RefSeq or GenBank

Display Settings:

Overview

Format

Summary

Send to:

Choose Destination

File
Clipboard
Collections

ID: 16639

Organism Overview ; Genome Assembly and Annotation report [2] ; Organelle Annotation Report [1]

Syngnathus typhle (broad-nosed pipefish)

Syngnathus typhle Overview

Lineage: Eukaryota[15557]; Metazoa[7782]; Chordata[3579]; Craniata[3544]; Vertebrata[3544]; Euteleostomi[3500]; Actinopterygii[1301]; Neopterygii[1292]; Teleostei[1289]; Neoteleostei[923]; Acanthomorphata[917]; Syngnathiaria[34]; Syngnathiformes[34]; Syngnathoidei[24]; Syngnathidae[24]; Syngnathus[5]; Syngnathus typhle[1]

Summary

Sequence data:

genome assemblies: 2

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 374.941

median protein count: 0

median GC%: 41.8143

NCBI Annotation Release:

Publications (limited to 20 most recent records)

Mitogenomic circumscription of a novel percomorph fish clade mainly comprising "Syngnathoidei" (Teleostei). Song HY, et al. Gene 2014 Jun 1

Representative (genome information for reference and representative genomes)

Reference genome:

Syngnathus typhle RoL_Styp_1.0

Loc	Type	Name	RefSeq	INSDC	Size (Mb)	GC%
		master WGS	-	JAWIVE000000000.1	435.3	43.7

	group	LG1	-	CM065956.1	29.86	42.9

	group	LG2	-	CM065957.1	28.65	42.5

	group	LG3	-	CM065958.1	24.84	42.7

	group	LG4	-	CM065959.1	24.39	42.5

	group	LG5	-	CM065960.1	21.22	42.6

	group	LG6	-	CM065961.1	21.07	43.0

	group	LG7	-	CM065962.1	18.8	42.9

	group	LG8	-	CM065963.1	16.42	42.9

	group	LG9	-	CM065964.1	15.89	43.7

	group	LG10	-	CM065965.1	15.44	43.0

	group	LG11	-	CM065966.1	14.91	43.3

	group	LG12	-	CM065967.1	13.71	43.0

	group	LG13	-	CM065968.1	13.58	44.6

	group	LG14	-	CM065969.1	13.43	43.7

	group	LG15	-	CM065970.1	12.92	44.3

	group	LG16	-	CM065971.1	11.92	43.8

	group	LG17	-	CM065972.1	11.62	44.6

	group	LG18	-	CM065973.1	10.43	44.5

	group	LG19	-	CM065974.1	9.73	44.1

	group	LG20	-	CM065975.1	9.5	44.7

	group	LG21	-	CM065976.1	9.2	45.2

	group	LG22	-	CM065977.1	8.99	44.3

		MT	-	CM065978.1	0.02	44.3

Chromosomes

Click on chromosome name to open Genome Data Viewer

Supplemental Content

NCBI Resources

Genome Data Viewer
Genome Data Viewer

Tools

BLAST Genome
BLAST Genome

Related information

Assembly
Related Assembly records
BioProject
Related BioProjects
Components
Constituent nucleotide sequence
PubMed
PubMed articles cited by genome record
Taxonomy
Taxonomy sequences associated with genome record

Recent activity

Clear Turn Off Turn On

Syngnathus typhle
Syngnathus typhle

Genome

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Genomes & Maps > Genome