Species | RefSeq assembly(ies) | Annotation Release | Freeze Date | Status |
---|---|---|---|---|
Zophobas morio (beetles) | CSIRO_AGI_Zmor_V1 (GCF_036711695.1) | GCF_036711695.1-RS_2024_03 | 2024-03-16 | In sequence databasesOn the FTP |
Daucus carota subsp. sativus (carrot) | DH1 v3.0 (GCF_001625215.2) | GCF_001625215.2-RS_2024_03 | 2024-03-08 | In sequence databasesOn the FTP |
Helicoverpa armigera (cotton bollworm) | ASM3070526v1 (GCF_030705265.1) | GCF_030705265.1-RS_2024_03 | 2024-03-21 | In sequence databasesOn the FTP |
Eleginops maclovinus (Patagonian blennie) | JC_Emac_rtc_rv5 (GCF_036324505.1) | GCF_036324505.1-RS_2024_03 | 2024-03-20 | In sequence databasesIn GeneOn the FTP |
Scylla paramamosain (green mud crab) | ASM3559412v1 (GCF_035594125.1) | GCF_035594125.1-RS_2024_03 | 2024-03-21 | In sequence databasesOn the FTP |
Culicoides brevitarsis (flies) | AGI_CSIRO_Cbre_v1 (GCF_036172545.1) | GCF_036172545.1-RS_2024_03 | 2024-03-14 | In sequence databasesIn GeneOn the FTP |
Ostrinia nubilalis (European corn borer) | ilOstNubi1.1 (GCF_963855985.1) | GCF_963855985.1-RS_2024_03 | 2024-03-21 | In sequence databasesOn the FTP |
Pseudophryne corroboree (corroboree frog) | aPseCor3.hap2 (GCF_028390025.1) | GCF_028390025.1-RS_2024_02 | 2024-02-29 | In sequence databases |
Symsagittifera roscoffensis (animals) | txSymRosc1.1 (GCF_963678635.1) | GCF_963678635.1-RS_2024_03 | 2024-03-16 | In sequence databasesIn GeneOn the FTP |
Eukaryotic RefSeq Genome Annotation Status
NCBI uses an automated pipeline to provide annotation on some RefSeq genome records. This page provides information about:
- Eukaryotic RefSeq genomes currently in the NCBI annotation pipeline
- Eukaryotic RefSeq genome annotations that were recently released
Another page shows all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each. If you do not see your genome of interest in these tables, please read the annotation policy and then make an annotation request.
Annotation runs in progress
An annotation run is marked in progress until the data produced is available in the sequence databases, in Gene and on the FTP site.
Recently completed annotation runs
Genomes annotated in the past 6 weeks.
FTP - FTP DownloadB - Organism-specific BLASTAR - Annotation ReportGDV - Genome Data Viewer
Species | RefSeq assembly(ies) | Annotation Release | Freeze Date | Release Date | Links | |||
---|---|---|---|---|---|---|---|---|
Bolinopsis microptera (comb jellies) | MBARI_Bmic_1.0 (GCF_026151205.1) | GCF_026151205.1-RS_2024_03 | 2024-03-16 | 2024-03-20 | FTP | B | AR | GDV |
Pan troglodytes (chimpanzee) | NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) | GCF_028858775.2-RS_2024_02 | 2024-02-27 | 2024-03-13 | FTP | B | AR | GDV |
Cydia splendana (moths) | ilCydSple1.2 (GCF_910591565.1) | GCF_910591565.1-RS_2024_02 | 2024-02-10 | 2024-03-08 | FTP | B | AR | GDV |
Pongo pygmaeus (Bornean orangutan) | NHGRI_mPonPyg2-v2.0_pri (GCF_028885625.2) | GCF_028885625.2-RS_2024_02 | 2024-02-27 | 2024-03-08 | FTP | B | AR | GDV |
Penaeus indicus (crustaceans) | CIBA_Pind_1.3 (GCF_018983055.1) | GCF_018983055.1-RS_2024_02 | 2024-02-23 | 2024-03-08 | FTP | B | AR | GDV |
Gorilla gorilla gorilla (western lowland gorilla) | NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) | GCF_029281585.2-RS_2024_02 | 2024-02-27 | 2024-03-07 | FTP | B | AR | GDV |
Pongo abelii (Sumatran orangutan) | NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) | GCF_028885655.2-RS_2024_02 | 2024-02-27 | 2024-03-06 | FTP | B | AR | GDV |
Symphalangus syndactylus (siamang) | NHGRI_mSymSyn1-v2.0_pri (GCF_028878055.2) | GCF_028878055.2-RS_2024_02 | 2024-02-27 | 2024-03-06 | FTP | B | AR | GDV |
Pan paniscus (pygmy chimpanzee) | NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) | GCF_029289425.2-RS_2024_02 | 2024-02-27 | 2024-03-06 | FTP | B | AR | GDV |
Cydia strobilella (moths) | ilCydStro3.1 (GCF_947568885.1) | GCF_947568885.1-RS_2024_02 | 2024-02-09 | 2024-03-06 | FTP | B | AR | GDV |
Mytilus trossulus (common blue mussel) | PNRI_Mtr1.1.1.hap1 (GCF_036588685.1) | GCF_036588685.1-RS_2024_02 | 2024-02-29 | 2024-03-06 | FTP | B | AR | GDV |
Cydia fagiglandana (moths) | ilCydFagi1.1 (GCF_963556715.1) | GCF_963556715.1-RS_2024_02 | 2024-02-09 | 2024-03-01 | FTP | B | AR | GDV |
Cydia amplana (moths) | ilCydAmpl1.1 (GCF_948474715.1) | GCF_948474715.1-RS_2024_02 | 2024-02-09 | 2024-02-28 | FTP | B | AR | GDV |
Pelmatolapia mariae (spotted tilapia) | Pm_UMD_F (GCF_036321145.1) | GCF_036321145.1-RS_2024_02 | 2024-02-26 | 2024-02-28 | FTP | B | AR | GDV |
Pelobates fuscus (common spadefoot toad) | aPelFus1.pri (GCF_036172605.1) | GCF_036172605.1-RS_2024_02 | 2024-02-23 | 2024-02-27 | FTP | B | AR | GDV |
Prinia subflava (tawny-flanked prinia) | Cam_Psub_1.2 (GCF_021018805.1) | GCF_021018805.1-RS_2024_02 | 2024-02-23 | 2024-02-26 | FTP | B | AR | GDV |
Cavia porcellus (domestic guinea pig) | mCavPor4.1 (GCF_034190915.1) | GCF_034190915.1-RS_2024_02 | 2024-02-14 | 2024-02-26 | FTP | B | AR | GDV |
Bacillus rossius redtenbacheri (walking sticks) | Brsri_v3 (GCF_032445375.1) | GCF_032445375.1-RS_2024_02 | 2024-02-23 | 2024-02-25 | FTP | B | AR | GDV |
Chroicocephalus ridibundus (black-headed gull) | bChrRid1.1 (GCF_963924245.1) | GCF_963924245.1-RS_2024_02 | 2024-02-23 | 2024-02-25 | FTP | B | AR | GDV |
Candoia aspera (snakes) | rCanAsp1.hap2 (GCF_035149785.1) | GCF_035149785.1-RS_2024_02 | 2024-02-15 | 2024-02-22 | FTP | B | AR | GDV |
Mobula hypostoma (lesser devil ray) | sMobHyp1.1 (GCF_963921235.1) | GCF_963921235.1-RS_2024_02 | 2024-02-14 | 2024-02-22 | FTP | B | AR | GDV |
Elgaria multicarinata webbii (lizards & snakes) | rElgMul1.1.pri (GCF_023053635.1) | GCF_023053635.1-RS_2024_02 | 2024-02-15 | 2024-02-22 | FTP | B | AR | GDV |
Rattus norvegicus (Norway rat) | GRCr8 (GCF_036323735.1) | GCF_036323735.1-RS_2024_02 | 2024-02-09 | 2024-02-22 | FTP | B | AR | GDV |
Engraulis encrasicolus (European anchovy) | IST_EnEncr_1.0 (GCF_034702125.1) | GCF_034702125.1-RS_2024_02 | 2024-02-08 | 2024-02-21 | FTP | B | AR | GDV |
Melospiza melodia melodia (song sparrow) | bMelMel2.pri (GCF_035770615.1) | GCF_035770615.1-RS_2024_02 | 2024-02-16 | 2024-02-21 | FTP | B | AR | GDV |
Cynocephalus volans (Philippine flying lemur) | mCynVol1.pri (GCF_027409185.1) | GCF_027409185.1-RS_2024_02 | 2024-02-16 | 2024-02-17 | FTP | B | AR | GDV |
Tables showing all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each, are avaliable here.