Genome

Methylophaga Group of uncharacterized isolates Lineage: Bacteria[37515]; Pseudomonadota[11108]; Gammaproteobacteria[4595]; Thiotrichales[153]; Piscirickettsiaceae[56]; Methylophaga[11]

Isolates from a population of Methylophaga which are clearly distinct from currently recognized species are tentatively designated at the species level. These unnamed isolates have not yet been characterized using traditional methods, or the species name has not yet been validly published.

Summary Sequence data:  genome assemblies: 103; sequence reads: 2  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 2.89444  median protein count: 2751  median GC%: 44.6 Publications (limited to 20 most recent records) A genomic catalogue of soil microbiomes boosts mining of biodiversity and genetic resources. Ma B, et al. Nat Commun 2023 Nov 11 Ecological Interactions of Cyanobacteria and Heterotrophs Enhances the Robustness of Cyanobacterial Consortium for Carbon Sequestration. Ataeian M, et al. Front Microbiol 2022 Active lithoautotrophic and methane-oxidizing microbial community in an anoxic, sub-zero, and hypersaline High Arctic spring. Magnuson E, et al. ISME J 2022 Jul Bacterial Community Assembly, Succession, and Metabolic Function during Outdoor Cultivation of Microchloropsis salina. Morris MM, et al. mSphere 2022 Aug 31 Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits. Zhou Z, et al. Microbiome 2022 Dec 27 MGnify: the microbiome analysis resource in 2020. Mitchell AL, et al. Nucleic Acids Res 2020 Jan 8 Genome- and Community-Level Interaction Insights into Carbon Utilization and Element Cycling Functions of Hydrothermarchaeota in Hydrothermal Sediment. Zhou Z, et al. mSystems 2020 Jan 7 Genome diversification in globally distributed novel marine Proteobacteria is linked to environmental adaptation. Zhou Z, et al. ISME J 2020 Aug Glacial-interglacial transitions in microbiomes recorded in deep-sea sediments from the western equatorial Atlantic. Freitas L, et al. Sci Total Environ 2020 Dec 1 A shared core microbiome in soda lakes separated by large distances. Zorz JK, et al. Nat Commun 2019 Sep 17 EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. Mitchell AL, et al. Nucleic Acids Res 2018 Jan 4 A dynamic microbial community with high functional redundancy inhabits the cold, oxic subseafloor aquifer. Tully BJ, et al. ISME J 2018 Jan The reconstruction of 2,631 draft metagenome-assembled genomes from the global oceans. Tully BJ, et al. Sci Data 2018 Jan 16 A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life. Parks DH, et al. Nat Biotechnol 2018 Nov Robust, high-productivity phototrophic carbon capture at high pH and alkalinity using natural microbial communities. Sharp CE, et al. Biotechnol Biofuels 2017 Simulation of Deepwater Horizon oil plume reveals substrate specialization within a complex community of hydrocarbon degraders. Hu P, et al. Proc Natl Acad Sci U S A 2017 Jul 11 Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life. Parks DH, et al. Nat Microbiol 2017 Nov More...