Genome

Aeromonas Aeromonas sp. overview Lineage: Bacteria[37515]; Pseudomonadota[11108]; Gammaproteobacteria[4595]; Aeromonadales[86]; Aeromonadaceae[61]; Aeromonas[34]

Isolates from a population of Aeromonas which are clearly distinct from currently recognized species are tentatively designated at the species level. These unnamed isolates have not yet been characterized using traditional methods, or the species name has not yet been validly published.

Summary Sequence data:  genome assemblies: 183; sequence reads: 23  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 4.5812  median protein count: 4096  median GC%: 60.9081 Publications (limited to 20 most recent records) Genomic structure predicts metabolite dynamics in microbial communities. Gowda K, et al. Cell 2022 Feb 3 A Glyphosate-Based Herbicide Cross-Selects for Antibiotic Resistance Genes in Bacterioplankton Communities. Barbosa da Costa N, et al. mSystems 2022 Apr 26 Characterization of Extended-Spectrum Beta-Lactamase-Producing Escherichia coli Isolates from Jurong Lake, Singapore with Whole-Genome-Sequencing. Zhong Y, et al. Int J Environ Res Public Health 2021 Jan 22 Prevalence and Genetic Analysis of Chromosomal mcr-3/7 in Aeromonas From U.S. Animal-Derived Samples. Wang Y, et al. Front Microbiol 2021 Metagenome-Assembled Genome Sequences from Different Wastewater Treatment Stages in Germany. Schneider D, et al. Microbiol Resour Announc 2021 Jul 8 Draft Genome Sequences of Three Shewanella sp. Strains Isolated from Urban Freshwaters in the Ohio River Valley, USA. Kappesser JL, et al. Microbiol Resour Announc 2021 Sep 16 MGnify: the microbiome analysis resource in 2020. Mitchell AL, et al. Nucleic Acids Res 2020 Jan 8 Tools for successful proliferation: diverse strategies of nutrient acquisition by a benthic cyanobacterium. Tee HS, et al. ISME J 2020 Aug Complete Genome Sequence of Escherichia coli GW-AmxH19, Isolated from Hospital Wastewater in Greifswald, Germany. Schneider D, et al. Microbiol Resour Announc 2020 May 21 Marine Plastics from Norwegian West Coast Carry Potentially Virulent Fish Pathogens and Opportunistic Human Pathogens Harboring New Variants of Antibiotic Resistance Genes. Radisic V, et al. Microorganisms 2020 Aug 7 Links between environment, diet, and the hunter-gatherer microbiome. Fragiadakis GK, et al. Gut Microbes 2019 A new genomic blueprint of the human gut microbiota. Almeida A, et al. Nature 2019 Apr Potential KPC-2 carbapenemase reservoir of environmental Aeromonas hydrophila and Aeromonas caviae isolates from the effluent of an urban wastewater treatment plant in Japan. Sekizuka T, et al. Environ Microbiol Rep 2019 Aug FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science. Sichtig H, et al. Nat Commun 2019 Jul 25 Characterization of NDM-5- and CTX-M-55-coproducing Escherichia coli GSH8M-2 isolated from the effluent of a wastewater treatment plant in Tokyo Bay. Sekizuka T, et al. Infect Drug Resist 2019 Necrotizing enterocolitis is preceded by increased gut bacterial replication, Klebsiella, and fimbriae-encoding bacteria. Olm MR, et al. Sci Adv 2019 Dec EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. Mitchell AL, et al. Nucleic Acids Res 2018 Jan 4 Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of Bacterial Plasmids Conferring Carbapenem Resistance. Weingarten RA, et al. mBio 2018 Feb 6 A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life. Parks DH, et al. Nat Biotechnol 2018 Nov Gut microbiome transition across a lifestyle gradient in Himalaya. Jha AR, et al. PLoS Biol 2018 Nov More... Dendrogram (based on genomic BLAST) External Resources Whole Genome Shotgun Project