Pelodiscus sinensis (ID 14578) - Genome - NCBI

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Pelodiscus sinensis (Chinese soft-shelled turtle)
Representative genome: Pelodiscus sinensis (assembly PelSin_1.0)
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ID: 14578

Organism Overview

Pelodiscus sinensis (Chinese soft-shelled turtle)

Pelodiscus sinensis overview

Lineage: Eukaryota[15558]; Metazoa[7784]; Chordata[3583]; Craniata[3548]; Vertebrata[3548]; Euteleostomi[3503]; Archelosauria[1076]; Testudinata[37]; Testudines[37]; Cryptodira[32]; Trionychia[5]; Trionychidae[4]; Pelodiscus[1]; Pelodiscus sinensis[1]

The Chinese soft-shelled turtle (Pelodiscus sinensis) is used to study the developmental evolution of the turtle carapace and is also a common pet and food item in Southeast Asia.

Summary

Submitter:

P. sinensis genome project consortium

Assembly level:

Scaffold

Assembly:

GCA_000230535.1 PelSin_1.0 scaffolds: 19,904 contigs: 205,380 N50: 21,993 L50: 28,686

BioProjects:

Whole Genome Shotgun (WGS):

INSDC: AGCU00000000.1

Statistics:

total length (Mb): 2202.48

protein count: 38574

GC%: 44.4999

NCBI Annotation Release:

Publications (limited to 20 most recent records)

The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan. Wang Z, et al. Nat Genet 2013 Jun
Skeletal gene expression in the temporal region of the reptilian embryos: implications for the evolution of reptilian skull morphology. Tokita M, et al. Springerplus 2013
cDNA-based gene mapping and GC3 profiling in the soft-shelled turtle suggest a chromosomal size-dependent GC bias shared by sauropsids. Kuraku S, et al. Chromosome Res 2006

Replicon Info

Loc	Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
	Un	-	.	-	2,202.47	44.5	38,574	3	489	6,864	24,843	362

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