Cherax quadricarinatus (ID 13161) - Genome

Cherax quadricarinatus
Representative genome: Cherax quadricarinatus (assembly ASM2687515v2)
Download sequences in FASTA format for genome, transcript, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Cherax quadricarinatus genome
All 2 genomes for species:
Browse the list
Download sequence and annotation from RefSeq or GenBank

Display Settings:

Overview

Format

Summary

Send to:

Choose Destination

File
Clipboard
Collections

Links from BioProject

ID: 13161

Organism Overview ; Genome Assembly and Annotation report [3] ; Organelle Annotation Report [1]

Cherax quadricarinatus

Cherax quadricarinatus overview

Lineage: Eukaryota[15558]; Metazoa[7784]; Ecdysozoa[3516]; Arthropoda[3302]; Crustacea[115]; Multicrustacea[90]; Malacostraca[64]; Eumalacostraca[64]; Eucarida[45]; Decapoda[45]; Pleocyemata[40]; Astacidea[5]; Parastacoidea[2]; Parastacidae[2]; Cherax[2]; Cherax quadricarinatus[1]

Summary

Sequence data:

genome assemblies: 3; sequence reads: 2

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 3954.01

median protein count: 34375

median GC%: 42.226

NCBI Annotation Release:

100

Publications (limited to 20 most recent records)

Cold stress regulates lipid metabolism via AMPK signalling in Cherax quadricarinatus. Wu D, et al. J Therm Biol 2020 Aug
A CqFerritin protein inhibits white spot syndrome virus infection via regulating iron ions in red claw crayfish Cherax quadricarinatus. Chen XX, et al. Dev Comp Immunol 2018 May
Exoskeletons across the Pancrustacea: Comparative Morphology, Physiology, Biochemistry and Genetics. Roer R, et al. Integr Comp Biol 2015 Nov
Characterization of heat shock protein 70 in the red claw crayfish (Cherax quadricarinatus): evidence for its role in regulating spermatogenesis. Fang DA, et al. Gene 2012 Jan 15
Differential gene expression profile from haematopoietic tissue stem cells of red claw crayfish, Cherax quadricarinatus, in response to WSSV infection. Liu HP, et al. Dev Comp Immunol 2011 Jul

More...

Representative (genome information for reference and representative genomes)

Reference genome:

Cherax quadricarinatus ASM2687515v2

Submitter: National Center for Biotechnology Information

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene
Chr	2	-	CM049196.1	132.68	42.3	-	-	-	-	-

Chr	3	-	CM049197.1	116.94	42.5	-	-	-	-	-

Chr	4	-	CM049198.1	113.19	42.7	-	-	-	-	-

Chr	5	-	CM049199.1	113.26	42.1	-	-	-	-	-

Chr	6	-	CM049200.1	106.82	42.4	-	-	-	-	-

Chr	7	-	CM049201.1	99.62	42.6	-	-	-	-	-

Chr	8	-	CM049202.1	89.69	42.1	-	-	-	-	-

Chr	9	-	CM049203.1	87.69	42.4	-	-	-	-	-

Chr	10	-	CM049204.1	87.39	42.2	-	-	-	-	-

Chr	11	-	CM049205.1	78.36	42.4	-	-	-	-	-

Chr	12	-	CM049206.1	77.39	42.2	-	-	-	-	-

Chr	13	-	CM049207.1	74.65	41.9	-	-	-	-	-

Chr	14	-	CM049208.1	74.45	42.0	-	-	-	-	-

Chr	15	-	CM049209.1	71.51	42.3	-	-	-	-	-

Chr	16	-	CM049210.1	71.05	42.2	-	-	-	-	-

Chr	17	-	CM049211.1	70.85	42.3	-	-	-	-	-

Chr	18	-	CM049212.1	68.24	41.8	-	-	-	-	-

Chr	19	-	CM049213.1	64.57	42.4	-	-	-	-	-

Chr	20	-	CM049214.1	60.33	41.7	-	-	-	-	-

Chr	21	-	CM049215.1	59.66	42.3	-	-	-	-	-

Chr	22	-	CM049216.1	59.3	42.5	-	-	-	-	-

Chr	23	-	CM049217.1	59.09	41.9	-	-	-	-	-

Chr	24	-	CM049218.1	52.48	42.2	-	-	-	-	-

Chr	25	-	CM049219.1	52.42	42.2	-	-	-	-	-

Chr	26	-	CM049220.1	50.99	42.4	-	-	-	-	-

Chr	27	-	CM049221.1	50.91	42.3	-	-	-	-	-

Chr	28	-	CM049222.1	50.67	41.7	-	-	-	-	-

Chr	29	-	CM049223.1	50.23	41.7	-	-	-	-	-

Chr	30	-	CM049224.1	49.46	42.3	-	-	-	-	-

Chr	31	-	CM049225.1	48.89	42.7	-	-	-	-	-

Chr	32	-	CM049226.1	48.51	42.7	-	-	-	-	-

Chr	33	-	CM049227.1	46.13	41.5	-	-	-	-	-

Chr	34	-	CM049228.1	45.74	42.0	-	-	-	-	-

Chr	35	-	CM049229.1	45.6	42.3	-	-	-	-	-

Chr	36	-	CM049230.1	45.26	42.0	-	-	-	-	-

Chr	37	-	CM049231.1	45.06	42.3	-	-	-	-	-

Chr	38	-	CM049232.1	44.21	41.4	-	-	-	-	-

Chr	39	-	CM049233.1	43.44	42.6	-	-	-	-	-

Chr	40	-	CM049234.1	42.73	42.9	-	-	-	-	-

Chr	41	-	CM049235.1	42.2	41.9	-	-	-	-	-

Chr	42	-	CM049236.1	41.96	42.1	-	-	-	-	-

Chr	43	-	CM049237.1	41.87	42.1	-	-	-	-	-

Chr	44	-	CM049238.1	41.66	42.8	-	-	-	-	-

Chr	45	-	CM049239.1	40.86	42.1	-	-	-	-	-

Chr	46	-	CM049240.1	40.42	42.3	-	-	-	-	-

Chr	47	-	CM049241.1	39.75	42.0	-	-	-	-	-

Chr	48	-	CM049242.1	39.75	41.9	-	-	-	-	-

Chr	49	-	CM049243.1	38.64	42.1	-	-	-	-	-

Chr	50	-	CM049244.1	38.57	41.9	-	-	-	-	-

Chr	51	-	CM049245.1	38.21	42.2	-	-	-	-	-

Chr	52	-	CM049246.1	37.62	41.9	-	-	-	-	-

Chr	53	-	CM049247.1	37.63	42.4	-	-	-	-	-

Chr	54	-	CM049248.1	37.65	43.0	-	-	-	-	-

Chr	55	-	CM049249.1	36.37	42.6	-	-	-	-	-

Chr	56	-	CM049250.1	36.16	42.1	-	-	-	-	-

Chr	57	-	CM049251.1	35.55	42.1	-	-	-	-	-

Chr	58	-	CM049252.1	35.55	42.2	-	-	-	-	-

Chr	59	-	CM049253.1	35.07	42.8	-	-	-	-	-

Chr	60	-	CM049254.1	34.95	42.3	-	-	-	-	-

Chr	61	-	CM049255.1	34.83	42.1	-	-	-	-	-

Chr	62	-	CM049256.1	33.9	42.0	-	-	-	-	-

Chr	63	-	CM049257.1	33.67	42.3	-	-	-	-	-

Chr	64	-	CM049258.1	33.25	42.2	-	-	-	-	-

Chr	65	-	CM049259.1	32.86	42.2	-	-	-	-	-

Chr	66	-	CM049260.1	32.33	42.3	-	-	-	-	-

Chr	67	-	CM049261.1	31.99	42.0	-	-	-	-	-

Chr	68	-	CM049262.1	31.9	42.3	-	-	-	-	-

Chr	69	-	CM049263.1	31.86	41.4	-	-	-	-	-

Chr	70	-	CM049264.1	30.88	42.1	-	-	-	-	-

Chr	71	-	CM049265.1	30.72	42.2	-	-	-	-	-

Chr	72	-	CM049266.1	30.88	42.6	-	-	-	-	-

Chr	73	-	CM049267.1	30.73	43.1	-	-	-	-	-

Chr	74	-	CM049268.1	30.61	42.1	-	-	-	-	-

Chr	75	-	CM049269.1	30.14	42.1	-	-	-	-	-

Chr	76	-	CM049270.1	30.08	41.9	-	-	-	-	-

Chr	77	-	CM049271.1	30.17	42.7	-	-	-	-	-

Chr	78	-	CM049272.1	30.05	41.5	-	-	-	-	-

Chr	79	-	CM049273.1	29.82	41.5	-	-	-	-	-

Chr	80	-	CM049274.1	29.64	42.2	-	-	-	-	-

Chr	81	-	CM049275.1	28.87	42.3	-	-	-	-	-

Chr	82	-	CM049276.1	28.17	43.5	-	-	-	-	-

Chr	83	-	CM049277.1	27.62	42.2	-	-	-	-	-

Chr	84	-	CM049278.1	27.43	42.2	-	-	-	-	-

Chr	85	-	CM049279.1	27.08	42.1	-	-	-	-	-

Chr	86	-	CM049280.1	26.4	42.2	-	-	-	-	-

Chr	87	-	CM049281.1	26.27	39.9	-	-	-	-	-

Chr	88	-	CM049282.1	26.16	43.3	-	-	-	-	-

Chr	89	-	CM049283.1	25.98	42.3	-	-	-	-	-

Chr	90	-	CM049284.1	25.57	42.3	-	-	-	-	-

Chr	91	-	CM049285.1	24.74	43.4	-	-	-	-	-

Chr	92	-	CM049286.1	24.46	42.5	-	-	-	-	-

Chr	93	-	CM049287.1	24.32	42.7	-	-	-	-	-

Chr	94	-	CM049288.1	24.38	42.9	-	-	-	-	-

Chr	95	-	CM049289.1	22.62	43.2	-	-	-	-	-

Chr	96	-	CM049290.1	21.47	43.5	-	-	-	-	-

Chr	97	-	CM049291.1	19.38	42.2	-	-	-	-	-

Chr	98	-	CM049292.1	19.25	43.8	-	-	-	-	-

Chr	99	-	CM049293.1	18.8	42.0	-	-	-	-	-

Chr	100	-	CM049294.1	18.54	42.0	-	-	-	-	-

	-	NC_022937.1	-	0.02	34.6	13	2	22	-	37

Un	-	.	-	566.96	42.0	-	-	-	-	-

Chromosomes

Click on chromosome name to open Genome Data Viewer

Genome

Display Settings:

Send to:

Links from BioProject

Summary

Publications (limited to 20 most recent records)

Representative (genome information for reference and representative genomes)

Chromosomes

Supplemental Content

NCBI Resources

Tools

Related information

Recent activity