Sequence data: | genome assemblies: 14; sequence reads: 45 | (See Genome Assembly and Annotation report) | | Statistics: | median total length (Mb): 2724.98 | median protein count: 42688 | median GC%: 41.96 | NCBI Annotation Release: | 107 |
- Chromosome-level genome assembly of Korean native cattle and pangenome graph of 14 Bos taurus assemblies. Jang J, et al. Sci Data 2023 Aug 23
- Unexpected cross-species contamination in genome sequencing projects. Merchant S, et al. PeerJ 2014
- The genome sequence of taurine cattle: a window to ruminant biology and evolution. Bovine Genome Sequencing and Analysis Consortium, et al. Science 2009 Apr 24
- A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol 2009
- Rapid communication: nucleotide sequence of the bovine elongation factor 1 alpha cDNA1. Kojima T, et al. J Anim Sci 2002 Jun
- Biochemical and molecular characterization of bovine fertilin alpha and beta (ADAM 1 and ADAM 2): a candidate sperm-egg binding/fusion complex. Waters SI, et al. Biol Reprod 1997 May
- Molecular cloning of NIPP-1, a nuclear inhibitor of protein phosphatase-1, reveals homology with polypeptides involved in RNA processing. Van Eynde A, et al. J Biol Chem 1995 Nov 24
- Identification of a novel class of mammalian Fc gamma receptor. Zhang G, et al. J Immunol 1995 Aug 1
- A spontaneous internal deletion of the c-myb protooncogene enhances transcriptional activation in bovine T lymphoma cells. Ishiguro N, et al. J Biol Chem 1994 Oct 28
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Reference genome: -
Bos taurus ARS-UCD2.0
Loc
|
Type
|
Name
|
RefSeq
|
INSDC
|
Size (Mb)
|
GC%
|
Protein
|
rRNA
|
tRNA
|
Other RNA
|
Gene
|
Pseudogene
|
---|
| Chr | 1 | NC_037328.1 | CM008168.2 | 158.53 | 40.1 | 2,501 | - | 67 | 574 | 1,420 | 188 | | | Chr | 2 | NC_037329.1 | CM008169.2 | 136.23 | 40.7 | 2,748 | - | 50 | 595 | 1,385 | 178 | | | Chr | 3 | NC_037330.1 | CM008170.2 | 121.01 | 41.8 | 3,672 | - | 155 | 668 | 1,965 | 243 | | | Chr | 4 | NC_037331.1 | CM008171.2 | 120 | 40.5 | 2,056 | - | 63 | 474 | 1,191 | 138 | | | Chr | 5 | NC_037332.1 | CM008172.2 | 120.09 | 41.7 | 3,508 | 1 | 55 | 693 | 1,880 | 262 | | | Chr | 6 | NC_037333.1 | CM008173.2 | 117.81 | 39.9 | 1,861 | - | 51 | 435 | 997 | 142 | | | Chr | 7 | NC_037334.1 | CM008174.2 | 110.68 | 41.8 | 3,543 | 2 | 56 | 646 | 1,928 | 254 | | | Chr | 8 | NC_037335.1 | CM008175.2 | 113.32 | 41.2 | 2,086 | 1 | 32 | 480 | 1,159 | 167 | | | Chr | 9 | NC_037336.1 | CM008176.2 | 105.45 | 40.0 | 1,485 | 1 | 41 | 454 | 883 | 142 | | | Chr | 10 | NC_037337.1 | CM008177.2 | 103.31 | 41.4 | 2,509 | - | 65 | 533 | 1,445 | 149 | | | Chr | 11 | NC_037338.1 | CM008178.2 | 106.98 | 42.9 | 3,025 | - | 44 | 563 | 1,423 | 125 | | | Chr | 12 | NC_037339.1 | CM008179.2 | 87.22 | 40.4 | 1,014 | - | 50 | 361 | 674 | 77 | | | Chr | 13 | NC_037340.1 | CM008180.2 | 83.47 | 43.7 | 2,342 | - | 44 | 497 | 1,185 | 97 | | | Chr | 14 | NC_037341.1 | CM008181.2 | 82.4 | 41.3 | 1,387 | - | 37 | 351 | 784 | 85 | | | Chr | 15 | NC_037342.1 | CM008182.2 | 85.01 | 41.7 | 2,309 | - | 48 | 332 | 1,568 | 291 | | | Chr | 16 | NC_037343.1 | CM008183.2 | 81.01 | 42.6 | 1,903 | - | 32 | 475 | 1,018 | 116 | | | Chr | 17 | NC_037344.1 | CM008184.2 | 73.17 | 42.3 | 1,902 | - | 45 | 358 | 897 | 93 | | | Chr | 18 | NC_037345.1 | CM008185.2 | 65.82 | 45.4 | 3,438 | - | 51 | 557 | 1,727 | 167 | | | Chr | 19 | NC_037346.1 | CM008186.2 | 63.45 | 46.0 | 3,561 | 1 | 70 | 705 | 1,744 | 119 | | | Chr | 20 | NC_037347.1 | CM008187.2 | 71.97 | 41.0 | 776 | 1 | 31 | 262 | 576 | 89 | | | Chr | 21 | NC_037348.1 | CM008188.2 | 69.86 | 43.0 | 1,520 | 2 | 26 | 549 | 990 | 121 | | | Chr | 22 | NC_037349.1 | CM008189.2 | 60.77 | 43.4 | 1,966 | 1 | 25 | 370 | 810 | 67 | | | Chr | 23 | NC_037350.1 | CM008190.2 | 52.5 | 43.3 | 1,867 | - | 201 | 390 | 1,230 | 101 | | | Chr | 24 | NC_037351.1 | CM008191.2 | 62.32 | 41.8 | 974 | - | 19 | 250 | 518 | 68 | | | Chr | 25 | NC_037352.1 | CM008192.2 | 42.35 | 47.1 | 2,003 | - | 67 | 322 | 1,006 | 55 | | | Chr | 26 | NC_037353.1 | CM008193.2 | 51.99 | 42.9 | 1,362 | 1 | 14 | 302 | 606 | 76 | | | Chr | 27 | NC_037354.1 | CM008194.2 | 45.61 | 41.7 | 657 | 3 | 36 | 187 | 429 | 39 | | | Chr | 28 | NC_037355.1 | CM008195.2 | 45.94 | 42.1 | 983 | - | 24 | 170 | 481 | 68 | | | Chr | 29 | NC_037356.1 | CM008196.2 | 51.1 | 44.2 | 1,732 | - | 24 | 308 | 962 | 114 | | | Chr | X | NC_037357.1 | CM008197.2 | 139.01 | 40.4 | 2,471 | - | 75 | 491 | 1,555 | 304 | | | Chr | Y | NC_082638.1 | CP128563.1 | 59.48 | 45.1 | 440 | - | 9 | 31 | 380 | - | | | | MT | NC_006853.1 | CM008198.1 | 0.02 | 39.4 | 13 | 2 | 22 | - | 37 | - | | | Un | - | . | - | 82.8 | 46.4 | 463 | - | 32 | 171 | 634 | 200 | |
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