Cygnus atratus (ID 9057) - Genome

Cygnus atratus (black swan)
Representative genome: Cygnus atratus (assembly CAtr_DNAZoo_HiC_assembly)
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ID: 9057

Organism Overview ; Genome Assembly and Annotation report [10] ; Organelle Annotation Report [1]

Cygnus atratus (black swan)

Cygnus atratus overview

Lineage: Eukaryota[15558]; Metazoa[7784]; Chordata[3583]; Craniata[3548]; Vertebrata[3548]; Euteleostomi[3503]; Archelosauria[1076]; Archosauria[1039]; Dinosauria[1034]; Saurischia[1034]; Theropoda[1034]; Coelurosauria[1034]; Aves[1034]; Neognathae[1009]; Galloanserae[81]; Anseriformes[46]; Anatidae[44]; Anserinae[9]; Cygnus[4]; Cygnus atratus[1]

Summary

Sequence data:

genome assemblies: 10

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 10911.5

median protein count: 36827

median GC%: 42

NCBI Annotation Release:

101

Publications (limited to 20 most recent records)

The complete mitochondrial genomes of the whistling duck (Dendrocygna javanica) and black swan (Cygnus atratus): dating evolutionary divergence in Galloanserae. Jiang F, et al. Mol Biol Rep 2010 Jul

Representative (genome information for reference and representative genomes)

Reference genome:

Cygnus atratus CAtr_DNAZoo_HiC_assembly

Submitter: The University of Queensland

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
Chr	1	NC_066362.1	CM044797.1	208.93	40.3	5,217	-	48	628	2,443	12

Chr	2	NC_066363.1	CM044798.1	160.44	39.9	3,323	-	36	550	1,617	20

Chr	3	NC_066364.1	CM044799.1	120.54	40.3	2,949	-	31	524	1,445	14

Chr	4	NC_066365.1	CM044800.1	77.68	39.8	1,898	-	3	267	890	8

Chr	5	NC_066366.1	CM044801.1	65.91	41.4	2,391	-	13	355	1,111	8

Chr	6	NC_066367.1	CM044802.1	40.57	41.3	1,379	-	54	206	620	3

Chr	7	NC_066368.1	CM044803.1	38.11	41.7	1,259	-	1	158	588	2

Chr	8	NC_066369.1	CM044804.1	33.03	42.1	1,180	-	2	139	593	3

Chr	9	NC_066370.1	CM044805.1	26.74	42.8	1,019	40	2	102	535	1

Chr	10	NC_066371.1	CM044806.1	22.47	43.4	847	1	1	106	392	1

Chr	11	NC_066372.1	CM044807.1	22.1	43.1	982	-	11	97	452	1

Chr	12	NC_066373.1	CM044808.1	21.87	42.3	820	-	17	84	435	2

Chr	13	NC_066374.1	CM044809.1	21.34	42.8	787	-	3	98	375	1

Chr	14	NC_066375.1	CM044810.1	20.19	44.8	779	-	1	73	407	3

Chr	15	NC_066376.1	CM044811.1	18.12	44.9	910	-	5	87	449	-

Chr	16	NC_066377.1	CM044812.1	16.28	46.0	766	-	4	92	382	1

Chr	17	NC_066378.1	CM044813.1	15.63	45.6	810	-	6	73	411	-

Chr	18	NC_066379.1	CM044814.1	13.18	47.1	666	-	12	79	363	6

Chr	19	NC_066380.1	CM044815.1	12.12	48.4	821	-	2	90	331	1

Chr	20	NC_066381.1	CM044816.1	12.11	46.8	631	-	3	71	355	-

Chr	21	NC_066382.1	CM044817.1	8.34	47.9	546	-	-	64	262	-

Chr	22	NC_066383.1	CM044818.1	7.93	49.5	370	2	1	46	189	1

Chr	23	NC_066384.1	CM044819.1	7.66	50.9	571	-	-	38	262	-

Chr	24	NC_066385.1	CM044820.1	7.01	52.2	533	-	4	21	287	1

Chr	25	NC_066386.1	CM044821.1	6.56	51.8	555	-	20	36	376	21

Chr	26	NC_066387.1	CM044822.1	5.9	52.9	580	-	4	43	318	-

Chr	27	NC_066388.1	CM044823.1	5.79	49.0	353	-	-	20	210	1

Chr	28	NC_066389.1	CM044824.1	2.65	57.1	421	-	2	11	228	1

Chr	29	NC_066390.1	CM044825.1	2.67	57.7	310	-	1	13	196	3

Chr	30	NC_066391.1	CM044826.1	0.45	57.6	62	-	-	9	35	-

Chr	31	NC_066392.1	CM044827.1	0.81	53.9	26	4	-	-	44	14

Chr	32	NC_066393.1	CM044828.1	0.69	50.7	17	-	-	-	14	1

Chr	33	NC_066394.1	CM044829.1	0.84	55.1	145	1	26	13	91	-

Chr	34	NC_066395.1	CM044830.1	0.85	52.0	44	-	-	-	57	13

Chr	35	NC_066396.1	CM044831.1	84.55	40.2	1,904	-	8	266	860	6

	MT	NC_012843.1	-	0.02	48.3	13	2	22	-	37	-

Un	-	.	-	14.16	55.0	943	6	53	94	799	52

Chromosomes

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Publications (limited to 20 most recent records)

Representative (genome information for reference and representative genomes)

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