Sphingobium baderi (ID 18267) - Genome - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Sphingobium baderi
Representative genome: Sphingobium baderi LL03
Download sequences in FASTA format for genome, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Sphingobium baderi genome, protein
All 4 genomes for species:
Browse the list
Download sequence and annotation from RefSeq or GenBank

Display Settings:

Overview

Format

Summary

Send to:

Choose Destination

File
Clipboard
Collections

Links from Taxonomy

ID: 18267

Organism Overview ; Genome Assembly and Annotation report [4] ; Plasmid Annotation Report [15]

Sphingobium baderi

Sphingobium baderi overview

Lineage: Bacteria[37505]; Pseudomonadota[11106]; Alphaproteobacteria[4466]; Sphingomonadales[589]; Sphingomonadaceae[355]; Sphingobium[44]; Sphingobium baderi[1]

Summary

Sequence data:

genome assemblies: 4

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 4.63846

median protein count: 4461

median GC%: 63.5696

Publications (limited to 20 most recent records)

Insights into Ongoing Evolution of the Hexachlorocyclohexane Catabolic Pathway from Comparative Genomics of Ten Sphingomonadaceae Strains. Pearce SL, et al. G3 (Bethesda) 2015 Apr 7
Draft Genome Sequence of a Hexachlorocyclohexane-Degrading Bacterium, Sphingobium baderi Strain LL03T. Kaur J, et al. Genome Announc 2013 Sep 19
Degradation of acetochlor by consortium of two bacterial strains and cloning of a novel amidase gene involved in acetochlor-degrading pathway. Li Y, et al. Bioresour Technol 2013 Nov

Representative (genome information for reference and representative genomes)

Reference genome:

Sphingobium baderi LL03

Submitter: CSIRO

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
Un	-	.	-	4.69	63.6	4,497	6	50	3	4,633	77

Dendrogram (based on genomic BLAST)

Supplemental Content

Tools

BLAST Genome
BLAST Genome

Related information

Assembly
Related Assembly records
BioProject
Related BioProjects
Components
Constituent nucleotide sequence
Protein
Constituent protein sequence
PubMed
PubMed articles cited by genome record
Taxonomy
Taxonomy sequences associated with genome record

Recent activity

Clear Turn Off Turn On

Sphingobium baderi
Sphingobium baderi

Genome
Genome Links for Taxonomy (Select 1114964) (1)
Genome

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Genomes & Maps > Genome