Genome

Lactiplantibacillus plantarum Common gastrointestinal bacterium used in food production Lineage: Bacteria[37505]; Bacillota[6130]; Bacilli[2619]; Lactobacillales[872]; Lactobacillaceae[454]; Lactiplantibacillus[21]; Lactiplantibacillus plantarum[1]

Lactobacillus. This is the largest genus of the lactic acid bacteria group, with over 50 species in total. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming More...from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.Lactobacillus plantarum. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora. Less...

Summary Sequence data:  genome assemblies: 1060; sequence reads: 17  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 3.27272  median protein count: 3000  median GC%: 44.4753 Publications (limited to 20 most recent records) MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy. Rocha U, et al. Mol Ecol Resour 2024 Feb Screening of Lactiplantibacillus plantarum NML21 and Its Maintenance on Postharvest Quality of Agaricus bisporus through Anti-Browning and Mitigation of Oxidative Damage. Shi C, et al. Foods 2024 Jan 3 Investigating the efficacy of an exopolysaccharide (EPS)-producing strain Lactiplantibacillus plantarum L75 on oat silage fermentation at different temperatures. Su R, et al. Microb Biotechnol 2024 Apr Homologous genes shared between probiotics and pathogens affect the adhesion of probiotics and exclusion of pathogens in the gut mucus of shrimp. Sha Y, et al. Front Microbiol 2023 Selection of lactic acid bacteria as biopreservation agents and optimization of their mode of application for the control of Listeria monocytogenes in ready-to-eat cooked meat products. Barcenilla C, et al. Int J Food Microbiol 2023 Oct 16 I am better than I look: genome based safety assessment of the probiotic Lactiplantibacillus plantarum IS-10506. Umanets A, et al. BMC Genomics 2023 Sep 4 Physiological and genomic characterization of Lactiplantibacillus plantarum isolated from Indri indri in Madagascar. Qiao N, et al. J Appl Microbiol 2023 Nov 1 The Mouse Gastrointestinal Bacteria Catalogue enables translation between the mouse and human gut microbiotas via functional mapping. Beresford-Jones BS, et al. Cell Host Microbe 2022 Jan 12 Draft Genome Sequences of Nine Bacillus Strains and Two Weizmannia Strains Isolated from Live Dietary Supplements and a Cultured Food Product. Barnaba TJ, et al. Microbiol Resour Announc 2022 Jan 20 Complete genome sequence of Lactiplantibacillus plantarum ST, a potential probiotic strain with antibacterial properties. Yang S, et al. J Anim Sci Technol 2022 Jan Evaluation of IR Biotyper for Lactiplantibacillus plantarum Typing and Its Application Potential in Probiotic Preliminary Screening. Li X, et al. Front Microbiol 2022 Genome Sequences for Levilactobacillus brevis Autochthonous to Commercial Cucumber Fermentations. Page CA, et al. Microbiol Resour Announc 2022 May 19 Comparative genomics reveals the organic acid biosynthesis metabolic pathways among five lactic acid bacterial species isolated from fermented vegetables. Okoye CO, et al. N Biotechnol 2022 Sep 25 Development of Resistance to Clarithromycin and Amoxicillin-Clavulanic Acid in Lactiplantibacillus plantarum In Vitro Is Followed by Genomic Rearrangements and Evolution of Virulence. Kostenko VV, et al. Microbiol Spectr 2022 Jun 29 Draft Genome Sequences of 18 Streptococcus Strains Isolated from Live Dietary Supplements and Cultured Food Products. Barnaba TJ, et al. Microbiol Resour Announc 2022 Jun 16 Optimizing Conditions in the Acid Tolerance Test for Potential Probiotics Using Response Surface Methodology. Ko HI, et al. Microbiol Spectr 2022 Aug 31 Mechanism of gastrointestinal adaptability and antioxidant function of infant-derived Lactobacillus plantarum BF_15 through genomics. Wang X, et al. Food Sci Biotechnol 2022 Oct Antifungal cultures and metabolites of lactic acid bacteria for use in dairy fermentations. Liang N, et al. Int J Food Microbiol 2022 Dec 16 Pangenome analyses of LuxS-coding genes and enzymatic repertoires in cocoa-related lactic acid bacteria. de Almeida OGG, et al. Genomics 2021 Jul A synthetic consortium of 100 gut commensals modulates the composition and function in a colon model of the microbiome of elderly subjects. Perez M, et al. Gut Microbes 2021 Jan-Dec More...  Representative (genome information for reference and representative genomes) Reference genome:   Lactiplantibacillus plantarum ASM991365v1 Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr - NZ_CP028221.1 CP028221.1 3.22 44.6 2,928 16 65 4 3,024 11 Dendrogram (based on genomic BLAST)