Genome

Cicer arietinum (chickpea) Cicer arietinum Organism overview Lineage: Eukaryota[15557]; Viridiplantae[1758]; Streptophyta[1641]; Embryophyta[1630]; Tracheophyta[1603]; Spermatophyta[1585]; Magnoliopsida[1558]; eudicotyledons[1256]; Gunneridae[1256]; Pentapetalae[1256]; rosids[782]; fabids[449]; Fabales[120]; Fabaceae[119]; Papilionoideae[90]; 50 kb inversion clade[87]; NPAAA clade[66]; Hologalegina[31]; IRL clade[29]; Cicereae[9]; Cicer[9]; Cicer arietinum[1]

Cicer arientinum, chickpea, is widely used for human food and livestock fodder. It is the third-most important grain legume. Modern breeding programs are attempting to develop cultivars that exhibit resistance to the most common phytopathogens.

Summary Sequence data:  genome assemblies: 5; sequence reads: 4  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 511.684  median protein count: 35754  median GC%: 32.6705 NCBI Annotation Release:  102 Publications (limited to 20 most recent records) An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.). Parween S, et al. Sci Rep 2015 Aug 11 Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Varshney RK, et al. Nat Biotechnol 2013 Mar A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.). Jain M, et al. Plant J 2013 Jun Complete plastid genome sequence of the chickpea (Cicer arietinum) and the phylogenetic distribution of rps12 and clpP intron losses among legumes (Leguminosae). Jansen RK, et al. Mol Phylogenet Evol 2008 Sep More...  Representative (genome information for reference and representative genomes) Reference genome:   Cicer arietinum ASM33114v1 Submitter: BGI-Shenzhen Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr Ca1 NC_021160.1 CM001764.1 48.36 32.1 4,074 1 80 587 3,361 144 Chr Ca2 NC_021161.1 CM001765.1 36.63 32.2 2,917 - 47 389 2,418 124 Chr Ca3 NC_021162.1 CM001766.1 39.99 31.7 3,761 18 64 511 3,092 151 Chr Ca4 NC_021163.1 CM001767.1 49.19 31.2 4,798 - 80 634 3,748 95 Chr Ca5 NC_021164.1 CM001768.1 48.17 32.3 4,186 4 79 557 3,407 127 Chr Ca6 NC_021165.1 CM001769.1 59.46 31.8 5,030 1 99 891 4,195 165 Chr Ca7 NC_021166.1 CM001770.1 48.96 31.7 4,117 - 79 663 3,400 107 Chr Ca8 NC_021167.1 CM001771.1 16.48 32.2 2,085 - 28 268 1,633 51 Pltd NC_011163.1 - 0.13 33.9 75 4 29 - 108 - Un - . - 183.52 34.2 4,711 165 81 1,603 4,982 500 Chromosomes Click on chromosome name to open Genome Data Viewer