Barley is an economically important cereal crop, along with wheat and rye. It belongs to the family Gramineae, tribe Triticieae. Barley is the most widely cultivated diploid member of this tribe, making it a good model for this entire group of plants. Obtaining barley sequence will be useful as it contains genes for agronomically desirable traits like
More...stress, pest and disease resistance. At the same time, sequence analysis will help improve the feed quality. Since the genome of members of Triticeae are large (about 5000 Mb for barley), barley researchers have put their efforts into developing a physical map of barley and creating large number of ESTs which are used to identify loci in a genetic map. The North American Barley Genome project is a multi-institutional, multidisciplinary project that is involved in locating and characterizing genes of economic importance and to use these genes in applied plant breeding. A number of groups have begun collecting sequence from different cultivars. Less...| Sequence data: | genome assemblies: 179; sequence reads: 17 | (See Genome Assembly and Annotation report) | | | Statistics: | median total length (Mb): 4276.75 | | median protein count: 55706 | | median GC%: 44.4575 | | NCBI Annotation Release: | 100 |
- High-Resolution Mapping of Barley mild mosaic virus Resistance Gene rym15. Wang Y, et al. Front Plant Sci 2022
- A lineage-specific Exo70 is required for receptor kinase-mediated immunity in barley. Holden S, et al. Sci Adv 2022 Jul 8
- The barley immune receptor Mla recognizes multiple pathogens and contributes to host range dynamics. Bettgenhaeuser J, et al. Nat Commun 2021 Nov 25
- The barley pan-genome reveals the hidden legacy of mutation breeding. Jayakodi M, et al. Nature 2020 Dec
- TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools. Monat C, et al. Genome Biol 2019 Dec 18
- A chromosome conformation capture ordered sequence of the barley genome. Mascher M, et al. Nature 2017 Apr 26
- Chromosome-scale shotgun assembly using an in vitro method for long-range linkage. Putnam NH, et al. Genome Res 2016 Mar
- Distribution, functional impact, and origin mechanisms of copy number variation in the barley genome. Muñoz-Amatriaín M, et al. Genome Biol 2013 Jun 12
- A physical, genetic and functional sequence assembly of the barley genome. International Barley Genome Sequencing Consortium, et al. Nature 2012 Nov 29
- 454 sequencing of pooled BAC clones on chromosome 3H of barley. Sato K, et al. BMC Genomics 2011 May 19
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Reference genome:  
Hordeum vulgare subsp. vulgareSubmitter: Leibniz Institute of Plant Genetics and Crop Plant Research |
Loc
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Type
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Name
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RefSeq
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INSDC
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Size (Mb)
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GC%
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Protein
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rRNA
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tRNA
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Other RNA
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Gene
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Pseudogene
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| Chr | 1H | NC_058518.1 | LR890096.1 | 516.51 | 44.4 | 4,954 | 130 | 159 | 1,129 | 5,531 | 715 | | | Chr | 2H | NC_058519.1 | LR890097.1 | 665.59 | 44.4 | 6,567 | 6,574 | 147 | 1,389 | 13,688 | 1,050 | | | Chr | 3H | NC_058520.1 | LR890098.1 | 621.52 | 44.4 | 6,187 | 4 | 229 | 1,121 | 6,435 | 813 | | | Chr | 4H | NC_058521.1 | LR890099.1 | 610.33 | 44.5 | 4,788 | 254 | 79 | 921 | 5,059 | 600 | | | Chr | 5H | NC_058522.1 | LR890100.1 | 588.22 | 44.5 | 6,117 | 343 | 155 | 1,209 | 6,724 | 800 | | | Chr | 6H | NC_058523.1 | LR890101.1 | 561.79 | 44.5 | 4,777 | 154 | 74 | 1,268 | 5,336 | 734 | | | Chr | 7H | NC_058524.1 | LR890102.1 | 632.54 | 44.4 | 6,057 | 957 | 140 | 1,304 | 7,408 | 898 | | | | Pltd | NC_008590.1 | - | 0.14 | 38.3 | 83 | 8 | 48 | - | 141 | - | | | Un | - | . | - | 29.08 | 47.8 | 754 | 6,256 | 916 | 80 | 8,116 | 168 | |
Click on chromosome name to open Genome Data Viewer |