Agrobacterium pusense (ID 21527) - Genome

Agrobacterium pusense
Representative genome: Agrobacterium pusense
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ID: 21527

Organism Overview ; Genome Assembly and Annotation report [59] ; Genome Tree report [24] ; Plasmid Annotation Report [25]

Agrobacterium pusense

Rhizobium pusense overview

Lineage: Bacteria[37515]; Pseudomonadota[11108]; Alphaproteobacteria[4469]; Hyphomicrobiales[1241]; Rhizobiaceae[237]; Rhizobium/Agrobacterium group[152]; Agrobacterium[22]; Agrobacterium pusense[1]

Summary

Sequence data:

genome assemblies: 59; sequence reads: 1

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 5.32729

median protein count: 4997

median GC%: 59.1576

Publications (limited to 20 most recent records)

MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy. Rocha U, et al. Mol Ecol Resour 2024 Feb
Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in most taxa. Magnúsdóttir S, et al. Front Microbiol 2023
The Mouse Gastrointestinal Bacteria Catalogue enables translation between the mouse and human gut microbiotas via functional mapping. Beresford-Jones BS, et al. Cell Host Microbe 2022 Jan 12
Poor Competitiveness of Bradyrhizobium in Pigeon Pea Root Colonization in Indian Soils. Chalasani D, et al. mBio 2021 Aug 31
Unexpected conservation and global transmission of agrobacterial virulence plasmids. Weisberg AJ, et al. Science 2020 Jun 5
FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science. Sichtig H, et al. Nat Commun 2019 Jul 25
Genomic Comparison of Agrobacterium pusense Strains Isolated from Bean Nodules. Aguilar A, et al. Front Microbiol 2016
Complete Genome Sequence of the Sesbania Symbiont and Rice Growth-Promoting Endophyte Rhizobium sp. Strain IRBG74. Crook MB, et al. Genome Announc 2013 Nov 21

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Representative (genome information for reference and representative genomes)

Reference genome:

Agrobacterium pusense ASM1328552v1

Submitter: Institute of plant protection,CAAS

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
Chr	R76C1	NZ_CP053856.1	CP053856.1	2.81	59.3	2,658	6	41	3	2,719	11

Chr	R76C2	NZ_CP053857.1	CP053857.1	2.08	59.4	1,862	6	13	1	1,907	25

Plsm	pR76	NZ_CP053858.1	CP053858.1	0.49	57.3	445	-	-	-	475	30

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Publications (limited to 20 most recent records)

Representative (genome information for reference and representative genomes)

Dendrogram (based on genomic BLAST)

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