Homarus americanus (ID 10711) - Genome - NCBI

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Homarus americanus (American lobster)
Representative genome: Homarus americanus (assembly GMGI_Hamer_2.0)
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ID: 10711

Organism Overview ; Organelle Annotation Report [1]

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Homarus americanus (American lobster)

This marine crustacean is a commercial resource

Lineage: Eukaryota[15558]; Metazoa[7784]; Ecdysozoa[3516]; Arthropoda[3302]; Crustacea[115]; Multicrustacea[90]; Malacostraca[64]; Eumalacostraca[64]; Eucarida[45]; Decapoda[45]; Pleocyemata[40]; Astacidea[5]; Nephropoidea[1]; Nephropidae[1]; Homarus[1]; Homarus americanus[1]

Homarus americanus, or American lobster, is a marine crustacean. It is a commercial fisheries resource and is of economic importance.

Summary

Submitter:

Gloucester Marine Genomics Institute, Inc.

Assembly level:

Scaffold

Assembly:

GCA_018991925.1 GMGI_Hamer_2.0 scaffolds: 47,246 contigs: 55,596 N50: 133,311 L50: 3,341

BioProjects:

Whole Genome Shotgun (WGS):

INSDC: JAHLQT000000000.1

Statistics:

total length (Mb): 2292.08

protein count: 40732

GC%: 43

NCBI Annotation Release:

Publications (limited to 20 most recent records)

The American lobster genome reveals insights on longevity, neural, and immune adaptations. Polinski JM, et al. Sci Adv 2021 Jun
Prediction of a neuropeptidome for the eyestalk ganglia of the lobster Homarus americanus using a tissue-specific de novo assembled transcriptome. Christie AE, et al. Gen Comp Endocrinol 2017 Mar 1
Neuropeptidergic Signaling in the American Lobster Homarus americanus: New Insights from High-Throughput Nucleotide Sequencing. Christie AE, et al. PLoS One 2015
Electrical coupling and innexin expression in the stomatogastric ganglion of the crab Cancer borealis. Shruti S, et al. J Neurophysiol 2014 Dec 1
The complete mitochondrial genome of the American lobster, Homarus americanus (Crustacea, Decapoda). Kim S, et al. Mitochondrial DNA 2011 Jun
Identification and cardiotropic actions of brain/gut-derived tachykinin-related peptides (TRPs) from the American lobster Homarus americanus. Christie AE, et al. Peptides 2008 Nov

Replicon Info

Loc	Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
		MT	NC_015607.1	-	0.02	30.5	13	2	22	-	13	-

	Un	-	.	-	2,292.06	43.0	40,719	646	1,182	4,641	27,418	574

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