Colinus virginianus (ID 12817) - Genome

Colinus virginianus (northern bobwhite)
Representative genome: Colinus virginianus (assembly Cv_LA_2.0)
BLAST against Colinus virginianus genome
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ID: 12817

Organism Overview ; Genome Assembly and Annotation report [3] ; Organelle Annotation Report [1]

Colinus virginianus (northern bobwhite)

Colinus virginianus overview

Lineage: Eukaryota[15557]; Metazoa[7782]; Chordata[3579]; Craniata[3544]; Vertebrata[3544]; Euteleostomi[3500]; Archelosauria[1076]; Archosauria[1039]; Dinosauria[1034]; Saurischia[1034]; Theropoda[1034]; Coelurosauria[1034]; Aves[1034]; Neognathae[1009]; Galloanserae[81]; Galliformes[35]; Odontophoridae[5]; Colinus[1]; Colinus virginianus[1]

Summary

Sequence data:

genome assemblies: 3

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 948.541

median protein count: 0

median GC%: 45.2

Publications (limited to 20 most recent records)

A Highly Contiguous Reference Genome for Northern Bobwhite (Colinus virginianus). Salter JF, et al. G3 (Bethesda) 2019 Dec 3
Annotated Draft Genome Assemblies for the Northern Bobwhite (Colinus virginianus) and the Scaled Quail (Callipepla squamata) Reveal Disparate Estimates of Modern Genome Diversity and Historic Effective Population Size. Oldeschulte DL, et al. G3 (Bethesda) 2017 Sep 7
A draft de novo genome assembly for the northern bobwhite (Colinus virginianus) reveals evidence for a rapid decline in effective population size beginning in the Late Pleistocene. Halley YA, et al. PLoS One 2014

Representative (genome information for reference and representative genomes)

Reference genome:

Colinus virginianus Cv_LA_2.0

Submitter: Louisiana State University

Name	RefSeq	INSDC	Size (Mb)	GC%
master WGS	-	VONY00000000.2	948.54	41.0

MT	-	CM018327.2	0.02	45.2

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