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13 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Gallus gallus			BW
GSE185775	Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Gallus gallus Monodelphis domestica Mus musculus	88		BW HIC	Michael I Robson	Sep 29, 2022
GSE175615	Conservation and divergence of DNA methylation patterns and functions in vertebrates	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Bos taurus Canis lupus familiaris Gallus gallus Homo sapiens Mus musculus Oryctolagus cuniculus Sus scrofa	62		BW IGV SRA Run Selector	Michael Weber	Mar 23, 2022
GSE164737	Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development [RNA-seq]	Expression profiling by high throughput sequencing	Gallus gallus Mus musculus	18		BW SRA Run Selector	Shalu Jhanwar	Jul 31, 2021
GSE164738	Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Gallus gallus Mus musculus	30		BW	Shalu Jhanwar	Jul 31, 2021
GSE166257	Chicken (Gallus gallus) Transcriptome of Intestinal, Immune, and Reproductive Cell and Tissue Types	Expression profiling by high throughput sequencing	Gallus gallus	20		BW SRA Run Selector	David Hawkins	Apr 26, 2021
GSE150006	The connectome of neural crest enhancers reveals regulatory features of signaling systems	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gallus gallus	25		BEDPE BW CSV SRA Run Selector	Marcos Simoes-Costa	Apr 03, 2021
GSE128818	Aberrant phase separation of transcription factors in human developmental disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Gallus gallus Mus musculus	19		BED BW MTX TSV SRA Run Selector	Denes Hnisz	May 07, 2020
GSE126880	Heterodimerization of Tfap2 pioneer factors drives epigenomic remodeling during neural crest specification	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	31		BW SRA Run Selector	Marcos Simoes-Costa	Dec 12, 2019
GSE97367	BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anolis carolinensis Gallus gallus Homo sapiens Monodelphis domestica Mus musculus Ornithorhynchus anatinus Xenopus tropicalis	197		BW TXT	Diego Cortez	Oct 27, 2017
GSE85757	Genome-wide binding of posterior HOXA/D transcription factors reveals subgrouping and association with CTCF [RNA-Seq]	Expression profiling by high throughput sequencing	Gallus gallus	20		BW TXT SRA Run Selector	Daniel Murad Ibrahim	Dec 31, 2016
GSE86089	Genome-wide binding of posterior HOXA/D transcription factors reveals subgrouping and association with CTCF	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	60		BW	Daniel Murad Ibrahim	Dec 31, 2016
GSE58766	Expression profiling of DT40 chicken B cell line by RNA-seq	Expression profiling by high throughput sequencing	Gallus gallus	1		BW SRA Run Selector	Andrew J Oler	Sep 04, 2015
GSE41338	The evolutionary landscape of alternative splicing in vertebrate species	Expression profiling by high throughput sequencing	Anolis carolinensis Gallus gallus Mus musculus Tetraodon nigroviridis Xenopus tropicalis	21		BW TXT SRA Run Selector	Nuno L Barbosa-Morais	Dec 22, 2012