GEO Browser - GEO

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309 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		GTF
GSE112846	scRNA-seq of a suite of transgenic driver and reporter mouse lines with enhanced brain cell type targeting and functionality	Expression profiling by high throughput sequencing	Mus musculus	4776	CSV FASTA GTF SRA Run Selector	Lucas T Gray	Jul 13, 2018
GSE98664	Single-cell full-length total RNA sequencing uncovers dynamics of recursive splicing and enhancer RNAs	Expression profiling by high throughput sequencing	Mus musculus	1507	BW CSV GTF TXT SRA Run Selector	Hiroaki Tateno	Feb 12, 2018
GSE125483	Conservation, acquisition, and functional impact of sex-biased gene expression in mammalian tissues	Expression profiling by high throughput sequencing	Canis lupus familiaris Macaca fascicularis Mus musculus Rattus norvegicus	307	GTF TXT SRA Run Selector	Sahin Naqvi	Jul 15, 2019
GSE79551	Hypothalamic transcriptome of male mice on high fat diet, from 99 strains	Expression profiling by high throughput sequencing	Mus musculus	282	GTF TXT SRA Run Selector	Yehudit Hasin-Brumshtein	Mar 24, 2016
GSE230380	Olfactory receptor mRNAs act as selfish non-coding RNAs that enforce transcriptional singularity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	279	GTF H5 TSV TXT	Ariel Pourmorady	Sep 28, 2023
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE140877	Nucleosome organization dynamics during fertilization reveals regulation factors of zygotic gene activation in mouse	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	180	BW GTF	Shaorong Gao	Apr 02, 2022
GSE221034	Bulk Omni-ATAC-seq in young (2 months) and aged (22-24 months) mice across 23 cell-types	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	166	BED BW GTF NARROWPEAK TXT	Christian Nefzger	Jul 15, 2024
GSE62486	T-bet recruits P-TEFb to super-enhancers to regulate T helper cell differentiation	Expression profiling by high throughput sequencing Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	143	BED GTF TXT	Richard Jenner	Jun 08, 2016
GSE43013	Gene Expression Defines Natural Changes in Mammalian Lifespan	Expression profiling by high throughput sequencing	Acomys cahirinus Bos taurus Canis lupus familiaris Capra hircus Cavia porcellus Chlorocebus aethiops Equus caballus Erinaceus europaeus Felis catus Meles meles Meriones unguiculatus Mesocricetus auratus Murina leucogaster Mus musculus Oryctolagus cuniculus Peromyscus leucopus Petaurus breviceps Rattus norvegicus Suncus murinus Sus scrofa Tadarida brasiliensis Tamias sibiricus Ursus americanus	141	GTF TXT SRA Run Selector	Alexey Fushan	Feb 17, 2015
GSE41637	Evolutionary dynamics of gene and isoform regulation in mammalian tissues	Expression profiling by high throughput sequencing	Bos taurus Gallus gallus Macaca mulatta Mus musculus Rattus norvegicus	134	GTF SRA Run Selector	Jason Merkin	Dec 21, 2012
GSE140345	Sleep-wake driven and circadian contributions to daily rhythms in gene expression and chromatin accessibility in the murine cortex	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	123	GTF TXT SRA Run Selector	Maxime Jan	Nov 13, 2019
GSE48138	Expression and regulation of lincRNAs during T cell development and differentiation	Expression profiling by high throughput sequencing	Mus musculus	122	BEDGRAPH GTF TXT SRA Run Selector	Gangqing Hu	Sep 23, 2013
GSE134311	scRCAT-seq: simultaneously profile RNA TSS and TES at single-cell level	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus synthetic construct	116	BED CSV GTF MTX TSV TXT SRA Run Selector	Jiawei Zhong	Aug 24, 2020
GSE63782	Transcriptional plasticity promotes primary and acquired resistance to BET bromodomain inhibition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	103	BED BW GTF TSV SRA Run Selector	Philipp Rathert	Sep 08, 2015
GSE67755	Chronic haloperidol effects on gene expression and chromatin accessibility in mouse brain	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	87	BED BW CEL GTF	Yunjung Kim	Apr 10, 2016
GSE162152	Identification and evolutionary comparison of circular RNAs in five mammalian species and three organs.	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Rattus norvegicus	84	GTF TXT SRA Run Selector	Franziska Gruhl	Sep 21, 2021
GSE173652	Asymmetrical forward and reverse developmental trajectories determine molecular programs of B cell antigen receptor editing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	77	BED BW GTF TXT SRA Run Selector	Mark Maienschein-Cline	Jul 06, 2022
GSE178096	Genetic-epigenetic interactions in paternal transgenerational inheritance of metabolic disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	75	BW GTF SRA Run Selector	Anne-Sophie Pépin	Mar 30, 2022
GSE204920	Cell type specific RNAseq from crosslinked and and TF-Sorted ventral neural tube cell types	Expression profiling by high throughput sequencing	Mus musculus	65	CSV GTF	M Joaquina Delas	Jun 06, 2022