171 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE253407
Droplet Hi-C enables scalable, single-cell profiling of chromatin architecture in heterogeneous tissues
24 Yang Xie Sep 04, 2024
GSE264646
Obtention of viable cell suspensions from breast cancer tumor biopsies for 3D chromatin conformation and single cell transcriptome analysis [Hi-C]
1 Mayra Furlan-Magaril Aug 27, 2024
GSE270363
Obtention of viable cell suspensions from breast cancer tumor biopsies for 3D chromatin conformation and single cell transcriptome analysis
3 Mayra Furlan-Magaril Aug 27, 2024
GSE214018
Super-enhancer-driven PPP1R15B/CReP, regulated by C/EBPβ and YY1, is oncogenic in multiple myeloma [HiChIP I]
8 Tze King Tan Jun 25, 2024
GSE267003
Super-enhancer-driven PPP1R15B/CReP, regulated by C/EBPβ and YY1, is oncogenic in multiple myeloma [HiChIP II]
8 Tze King Tan Jun 25, 2024
GSE267004
Super-enhancer-driven PPP1R15B/CReP, regulated by C/EBPβ and YY1, is oncogenic in multiple myeloma
16 Tze King Tan Jun 25, 2024
GSE246674
Characterization of Transcriptome and Chromatin Interactome in Accessible Regions at Single-cell Resolution by scAIR
2 Tian (Simon) Zhongyuan May 21, 2024
GSE267083
The landscape of RNA-chromatin interaction reveals small non coding RNAs as essential mediators of leukemia maintenance [iMARGI]
4
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Haiyang Yun May 14, 2024
GSE267330
CRISPR Screening Uncovers a Long-Range Enhancer for ONECUT1 in Pancreatic Differentiation and Links a Diabetes Risk Variant
33 Samuel Joseph Kaplan May 14, 2024
GSE263174
CRISPR Screening Uncovers a Long-Range Enhancer for ONECUT1 in Pancreatic Differentiation and Links a Diabetes Risk Variant [Hi-C]
2 4DN DCIC Apr 30, 2024
GSE238001
Concurrent profiling of multiscale 3D genome organization and gene expression in single mammalian cells
18 Jian Ma Mar 27, 2024
GSE237268
Transcription-Associated Chromatin Reorganization During Cellular Rejuvenation (Hi-C)
6
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Shivashankar GV Mar 20, 2024
GSE237271
Transcription-Associated Chromatin Reorganization During Cellular Rejuvenation
12 Shivashankar GV Mar 20, 2024
GSE239969
Simultaneous single-cell three-dimensional genome and gene expression profiling Uncovers Dynamic Enhancer Connectivity Underlying Olfactory Receptor Choice [olfactory, single-cell RNA & Hi-C]
822 Xiaoliang Sunney Xie Jan 15, 2024
GSE240114
Simultaneous single-cell three-dimensional genome and gene expression profiling Uncovers Dynamic Enhancer Connectivity Underlying Olfactory Receptor Choice [cell line, single-cell RNA-Seq & Hi-C]
778 Xiaoliang Sunney Xie Jan 15, 2024
GSE240128
Simultaneous single-cell three-dimensional genome and gene expression profiling uncovers dynamic enhancer connectivity underlying olfactory receptor choice
1743 Xiaoliang Sunney Xie Jan 15, 2024
GSE166155
KARR-seq reveals principles of high-order ribonucleoprotein structure assembly
67 Youzhi Cheng Dec 06, 2023
GSE243476
4DNES18BMU79 - Replicate experiments of in situ Hi-C on olfactory receptor cell with DpnII
2 4DN DCIC Sep 19, 2023
GSE243477
4DNES425UDGS - Replicate experiments of in situ Hi-C on immediate neuronal precursor cell with DpnII
2 4DN DCIC Sep 19, 2023
GSE243478
4DNES54YB6TQ - Replicate experiments of in situ Hi-C on olfactory receptor cell with DpnII
2 4DN DCIC Sep 19, 2023